| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bchX [H]
Identifier: 83594310
GI number: 83594310
Start: 3431508
End: 3432476
Strand: Reverse
Name: bchX [H]
Synonym: Rru_A2980
Alternate gene names: 83594310
Gene position: 3432476-3431508 (Counterclockwise)
Preceding gene: 83594311
Following gene: 83594309
Centisome position: 78.86
GC content: 63.05
Gene sequence:
>969_bases ATGAGCGCGCCCCTCCGCGATGTGGCCGCGATTACCCCCGCCCCTCTGGCGTCGACCGCCAAGAAGGAGACGCAGGTCAT CGCGATCTATGGCAAGGGCGGCATCGGCAAAAGTTTCACGCTCGCCAACCTGTCCTACATGATGGCGCAGAAGGGCAAAC GCGTTCTTCTGATCGGCTGTGACCCTAAAAGCGACACCACGTCGCTGCTGTTCGGTGGCCGGGCTTGCCCGACCATCATC GAGACTTCGTCGGCGCGCAAGCTCGCCGGCGAGGACCTTGGTATCGGCGACGTGTGCTTCAAGCGCGACGGCGTCTATGC CATGGAGCTGGGCGGTCCCGAGGTGGGTCGGGGCTGCGGTGGCAGGGGAATTATCCATGGGTTTGAAACCCTGGAAAAGC TTGGCTTTCACGAGTGGGGCTTCGACTACGTCCTGCTCGACTTCCTTGGTGACGTGGTTTGCGGGGGCTTCGGTCTGCCG ATCGCCCGCGATCTTTGTCAGAAAGTGATCGTTGTCGGGTCTAACGACCTGCAGTCCCTCTATGTCGTCAACAACGTCTG CTCGGCGGTGACCTATTTCCGCAAGATGGGCGGCAATGTCGGCGTGGCGGGGATGGTCATCAACAAGGATGACGGGACCG GCGAGGCTCAGGCCTTCGCCGCGAAGGCGGGCTTGCCGGTCCTGGCGTCCATTCCCGCCGACGAGGATCTGCGACGCAAA AGCGCCGCTTATCAGATCGTCGGCCGTCCCGGATCCCCCTGGGGTCCGCTGTTTGAACAGCTTGCGATCAACGTGGGGGA GGCACCGCCCCTGCAGCCGACGCCGCTCGATCAGGACAGCCTGCTTGGCCTGTTCAGCGGAGACGAGGTGGGTCGAGACG TGGTGCTTGAACCGGCCACTCCCGAAGACATGCGCGGGGGCGCTGTCGTCGAGAAGGCCTCGCTTGAAGTGGTTTACGAT AGCGTCTGA
Upstream 100 bases:
>100_bases TCACCCACCGCGAGGAGGCCCCGCAGGCCGCCTCGGCTTATCGGACGGCGTTCACCGACCCGTCTTGTCTGAAGATGGTT TTGGATTGGAGAGCTTGCTC
Downstream 100 bases:
>100_bases GTTTTTCCGTCCGCCTTTCGTTTGCTTTTCCGCTGGTCTTCGCTCCCAATTTTTTGGAATCCCGTTCGCGATGGCACCCT TCGACCACACCAGTGAAATC
Product: chlorophyllide reductase iron protein subunit X
Products: NA
Alternate protein names: Chlorin reductase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSAPLRDVAAITPAPLASTAKKETQVIAIYGKGGIGKSFTLANLSYMMAQKGKRVLLIGCDPKSDTTSLLFGGRACPTII ETSSARKLAGEDLGIGDVCFKRDGVYAMELGGPEVGRGCGGRGIIHGFETLEKLGFHEWGFDYVLLDFLGDVVCGGFGLP IARDLCQKVIVVGSNDLQSLYVVNNVCSAVTYFRKMGGNVGVAGMVINKDDGTGEAQAFAAKAGLPVLASIPADEDLRRK SAAYQIVGRPGSPWGPLFEQLAINVGEAPPLQPTPLDQDSLLGLFSGDEVGRDVVLEPATPEDMRGGAVVEKASLEVVYD SV
Sequences:
>Translated_322_residues MSAPLRDVAAITPAPLASTAKKETQVIAIYGKGGIGKSFTLANLSYMMAQKGKRVLLIGCDPKSDTTSLLFGGRACPTII ETSSARKLAGEDLGIGDVCFKRDGVYAMELGGPEVGRGCGGRGIIHGFETLEKLGFHEWGFDYVLLDFLGDVVCGGFGLP IARDLCQKVIVVGSNDLQSLYVVNNVCSAVTYFRKMGGNVGVAGMVINKDDGTGEAQAFAAKAGLPVLASIPADEDLRRK SAAYQIVGRPGSPWGPLFEQLAINVGEAPPLQPTPLDQDSLLGLFSGDEVGRDVVLEPATPEDMRGGAVVEKASLEVVYD SV >Mature_321_residues SAPLRDVAAITPAPLASTAKKETQVIAIYGKGGIGKSFTLANLSYMMAQKGKRVLLIGCDPKSDTTSLLFGGRACPTIIE TSSARKLAGEDLGIGDVCFKRDGVYAMELGGPEVGRGCGGRGIIHGFETLEKLGFHEWGFDYVLLDFLGDVVCGGFGLPI ARDLCQKVIVVGSNDLQSLYVVNNVCSAVTYFRKMGGNVGVAGMVINKDDGTGEAQAFAAKAGLPVLASIPADEDLRRKS AAYQIVGRPGSPWGPLFEQLAINVGEAPPLQPTPLDQDSLLGLFSGDEVGRDVVLEPATPEDMRGGAVVEKASLEVVYDS V
Specific function: Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010246 - InterPro: IPR000392 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: NA
Molecular weight: Translated: 33799; Mature: 33668
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLRDVAAITPAPLASTAKKETQVIAIYGKGGIGKSFTLANLSYMMAQKGKRVLLIGC CCCCCCHHHHCCCCCCHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEC DPKSDTTSLLFGGRACPTIIETSSARKLAGEDLGIGDVCFKRDGVYAMELGGPEVGRGCG CCCCCCCEEEECCCCCCHHEECCCCHHHCCCCCCCCHHEEECCCEEEEECCCCHHCCCCC GRGIIHGFETLEKLGFHEWGFDYVLLDFLGDVVCGGFGLPIARDLCQKVIVVGSNDLQSL CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCHHHH YVVNNVCSAVTYFRKMGGNVGVAGMVINKDDGTGEAQAFAAKAGLPVLASIPADEDLRRK HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHH SAAYQIVGRPGSPWGPLFEQLAINVGEAPPLQPTPLDQDSLLGLFSGDEVGRDVVLEPAT CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCEEEECCCC PEDMRGGAVVEKASLEVVYDSV CCCCCCCEEEEECEEEEEEECC >Mature Secondary Structure SAPLRDVAAITPAPLASTAKKETQVIAIYGKGGIGKSFTLANLSYMMAQKGKRVLLIGC CCCCCHHHHCCCCCCHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEC DPKSDTTSLLFGGRACPTIIETSSARKLAGEDLGIGDVCFKRDGVYAMELGGPEVGRGCG CCCCCCCEEEECCCCCCHHEECCCCHHHCCCCCCCCHHEEECCCEEEEECCCCHHCCCCC GRGIIHGFETLEKLGFHEWGFDYVLLDFLGDVVCGGFGLPIARDLCQKVIVVGSNDLQSL CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCHHHH YVVNNVCSAVTYFRKMGGNVGVAGMVINKDDGTGEAQAFAAKAGLPVLASIPADEDLRRK HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHH SAAYQIVGRPGSPWGPLFEQLAINVGEAPPLQPTPLDQDSLLGLFSGDEVGRDVVLEPAT CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCEEEECCCC PEDMRGGAVVEKASLEVVYDSV CCCCCCCEEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8437569; 10648776 [H]