| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yiaG [C]
Identifier: 83594273
GI number: 83594273
Start: 3389829
End: 3390122
Strand: Direct
Name: yiaG [C]
Synonym: Rru_A2941
Alternate gene names: 83594273
Gene position: 3389829-3390122 (Clockwise)
Preceding gene: 83594272
Following gene: 83594283
Centisome position: 77.88
GC content: 65.99
Gene sequence:
>294_bases ATGGGCGATGACCTGATAGAGGCGATGGCCGAGGCCGTGGCCTACATGGACGGCAAGACAAAGGGCTTGGTGACGCACGA GGTCCTGGTTCCCGATGATGTGGACGTGGCGGCGATCCGCAAGGGACTGGGCCTTACCCGCAGCGCCTTCTGCCGCCGCT TCGGCCTCGACATCCGCGCGGTGCAGGAATGGGAGCAGAAGCGACGGCGCCCGGATCGGGCGGCACGCGCCTTGATGCTG GTCATCAAGCATAACCCGCAAGCGGTTGAAGCCGCCTTGCACGACGCCGCCTGA
Upstream 100 bases:
>100_bases GCCCTATGATCACCAAGCCAATCACCATCGTGGAACTGAGCGCCTTCACCCGTCGGGCGGAAAAACTCCTATCAGCGGAA AGGCAGGAACCATGAGCAAG
Downstream 100 bases:
>100_bases CGACCAGGACGCTTCCGACCGGGCGGCGACCAGAGACTGAGAGCGGGGACCGTGAAGTCTGGCCCCCATCACCGCTCTAA GGTCTTGATAGTCAAGAAAA
Product: putative DNA-binding protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator Xre
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MGDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRAVQEWEQKRRRPDRAARALML VIKHNPQAVEAALHDAA
Sequences:
>Translated_97_residues MGDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRAVQEWEQKRRRPDRAARALML VIKHNPQAVEAALHDAA >Mature_96_residues GDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRAVQEWEQKRRRPDRAARALMLV IKHNPQAVEAALHDAA
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10738; Mature: 10606
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRA CCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHCCCHHH VQEWEQKRRRPDRAARALMLVIKHNPQAVEAALHDAA HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure GDDLIEAMAEAVAYMDGKTKGLVTHEVLVPDDVDVAAIRKGLGLTRSAFCRRFGLDIRA CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHCCCHHH VQEWEQKRRRPDRAARALMLVIKHNPQAVEAALHDAA HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA