| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594250
Identifier: 83594250
GI number: 83594250
Start: 3360246
End: 3360761
Strand: Direct
Name: 83594250
Synonym: Rru_A2918
Alternate gene names: NA
Gene position: 3360246-3360761 (Clockwise)
Preceding gene: 83594248
Following gene: 83594255
Centisome position: 77.2
GC content: 50.0
Gene sequence:
>516_bases ATGGTTCAGCAATCAATTTCTGGGGTCGATGCGATGGGCTATTATTTGACGGCACAAGTCTGCGGCAATGGACACCATAC AACATCGAGCGTCGAGCATTCTCCGAACTTGATGGCGAATTTCTGTGATAAATGCGGCTCGGAAACCATGACGAAATGCC CCTCTTGTTCTACGAAGATCAGGGGCAAGTATTACGTTGATGACTTTGCAATCATTGGCCAAAATTACACAGCACCCAGC TTTTGCCACGCGTGCGGCAAAGCTTTCCCTTGGACGACGACTAAGATCGAAGCTGCCAAGGAAATGGTCGAAGAAATTGA TGAACTTTCCCCGGACGAACGGGAGAAGCTGAAAGGCGCCATTGACGACATCGTGATCGAGGGGGCGCGAACTGAGTTAG GCGCGAATCGCTTCAAGAAATTGTTGACGAAGATGGGTAGTGCCAGCGCCTCAGCTATGCGGGATATCGTTGTCGATGTT ATCAGCGAGACAGCGAAGAAGATCATCTTCCCGTAA
Upstream 100 bases:
>100_bases GGTAACTGCGTTATGGCGGTTTTTTCCAACTCTTGAATACCCCTTAGACTTGGTTCACGAGCGTCCTAGAGGTTGCTAGA TTGGCATGTCTCATTGAGCT
Downstream 100 bases:
>100_bases CGACCCGCCTCCATGGTGGCTTGGAGCATGCCCATTCATTCCTCTGCCCAGAGATCTGAAGAGACGCTCTCAGAGACAAA AACGAGTGCCGGTAATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MVQQSISGVDAMGYYLTAQVCGNGHHTTSSVEHSPNLMANFCDKCGSETMTKCPSCSTKIRGKYYVDDFAIIGQNYTAPS FCHACGKAFPWTTTKIEAAKEMVEEIDELSPDEREKLKGAIDDIVIEGARTELGANRFKKLLTKMGSASASAMRDIVVDV ISETAKKIIFP
Sequences:
>Translated_171_residues MVQQSISGVDAMGYYLTAQVCGNGHHTTSSVEHSPNLMANFCDKCGSETMTKCPSCSTKIRGKYYVDDFAIIGQNYTAPS FCHACGKAFPWTTTKIEAAKEMVEEIDELSPDEREKLKGAIDDIVIEGARTELGANRFKKLLTKMGSASASAMRDIVVDV ISETAKKIIFP >Mature_171_residues MVQQSISGVDAMGYYLTAQVCGNGHHTTSSVEHSPNLMANFCDKCGSETMTKCPSCSTKIRGKYYVDDFAIIGQNYTAPS FCHACGKAFPWTTTKIEAAKEMVEEIDELSPDEREKLKGAIDDIVIEGARTELGANRFKKLLTKMGSASASAMRDIVVDV ISETAKKIIFP
Specific function: Unknown
COG id: COG4306
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18643; Mature: 18643
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQQSISGVDAMGYYLTAQVCGNGHHTTSSVEHSPNLMANFCDKCGSETMTKCPSCSTKI CCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCC RGKYYVDDFAIIGQNYTAPSFCHACGKAFPWTTTKIEAAKEMVEEIDELSPDEREKLKGA CCEEEECHHHEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH IDDIVIEGARTELGANRFKKLLTKMGSASASAMRDIVVDVISETAKKIIFP HHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVQQSISGVDAMGYYLTAQVCGNGHHTTSSVEHSPNLMANFCDKCGSETMTKCPSCSTKI CCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCC RGKYYVDDFAIIGQNYTAPSFCHACGKAFPWTTTKIEAAKEMVEEIDELSPDEREKLKGA CCEEEECHHHEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH IDDIVIEGARTELGANRFKKLLTKMGSASASAMRDIVVDVISETAKKIIFP HHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA