| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594244
Identifier: 83594244
GI number: 83594244
Start: 3355303
End: 3356112
Strand: Direct
Name: 83594244
Synonym: Rru_A2912
Alternate gene names: NA
Gene position: 3355303-3356112 (Clockwise)
Preceding gene: 83594243
Following gene: 83594245
Centisome position: 77.08
GC content: 72.72
Gene sequence:
>810_bases ATGACCCGTCGCATGATGCTTCTTCTCCCGCTCACCGCCGGCCTGCTTGCCGCCCCCGCCCTGGCCTTCGCTTTCGGGCC GGGCGGCGACGGATGCGGCCCCATGGGCCCCGACCGCATGGGTGGCCCGATGGGCGGGCGCGGCGCCCCCATCGCCCAGA TGCGCGAGGCGGCGAACGCCGCCACCCTCGGTTTGGCAGAAGCCGTGCAAAAGGCCCGCTCCACCGCCCCCGGCACCGTC ACCCTGGCCCGGCTGTCGCCCTTCGCCGTCGCCGCCCCGGGCGCCGATCGCCCCAGCAGCTTCGCCGATCCGGCCCTGAA GCCGACCTATTTGGTCAGCGTGATCGAGGGTGACACCCGGCGCATCGTCGCCGTTGACGCCGCCACCGGTCAGGCCGCCG TGGTTGGCAGCGCCTCGGGCATCCTCGCCTATCGCGGCGGCTTCTCCGGCCACCCCGGCATGGGCGGCCCCCGTCATGCC CGCACCCCGGTCGATCTGAGCGGCGCCAAGGTCACCGCCGATCAGGCGATCACCACCGCCGTCGAAAAGATGGGCTCGGG CAAGGCGATGATGGTCAAGGGCATCCGCCGTGGCGATGACAGCGCCTGGGTGGTGGCCGTCGCGCCGAGCGCCGCCGATG GCGCGGCGACGATGGTCTTCATCGACCCCGATAGCGGCTCCGTGCTAAGCACGCGTCAGATGCCCAACAAGATGGGCAGG CCCGGCAATCCGGGATCGATCCCCCCGGCGGACGGCGCCGACACCCTGCCTGACGCCGACGACGACACCCCCGACGCGTC CCCGCGTTGA
Upstream 100 bases:
>100_bases GATATTACCAAGACGTAACCGCCGCGCCACCGGCCGGTCAGGGCGGGGGGGCTAGTCTTCCTTCCATTGGATGACTTCCC CCCTGCAAAGGACACCGCCG
Downstream 100 bases:
>100_bases TCTAAGACCCAACGCGTCCTCGCGTTGATAACGGAAAGGGAGGGCGGCCCGATGCGCATCCTGGTGATCGAGGATGACAA GGAGGTGGCCGCCCACCTTC
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTRRMMLLLPLTAGLLAAPALAFAFGPGGDGCGPMGPDRMGGPMGGRGAPIAQMREAANAATLGLAEAVQKARSTAPGTV TLARLSPFAVAAPGADRPSSFADPALKPTYLVSVIEGDTRRIVAVDAATGQAAVVGSASGILAYRGGFSGHPGMGGPRHA RTPVDLSGAKVTADQAITTAVEKMGSGKAMMVKGIRRGDDSAWVVAVAPSAADGAATMVFIDPDSGSVLSTRQMPNKMGR PGNPGSIPPADGADTLPDADDDTPDASPR
Sequences:
>Translated_269_residues MTRRMMLLLPLTAGLLAAPALAFAFGPGGDGCGPMGPDRMGGPMGGRGAPIAQMREAANAATLGLAEAVQKARSTAPGTV TLARLSPFAVAAPGADRPSSFADPALKPTYLVSVIEGDTRRIVAVDAATGQAAVVGSASGILAYRGGFSGHPGMGGPRHA RTPVDLSGAKVTADQAITTAVEKMGSGKAMMVKGIRRGDDSAWVVAVAPSAADGAATMVFIDPDSGSVLSTRQMPNKMGR PGNPGSIPPADGADTLPDADDDTPDASPR >Mature_268_residues TRRMMLLLPLTAGLLAAPALAFAFGPGGDGCGPMGPDRMGGPMGGRGAPIAQMREAANAATLGLAEAVQKARSTAPGTVT LARLSPFAVAAPGADRPSSFADPALKPTYLVSVIEGDTRRIVAVDAATGQAAVVGSASGILAYRGGFSGHPGMGGPRHAR TPVDLSGAKVTADQAITTAVEKMGSGKAMMVKGIRRGDDSAWVVAVAPSAADGAATMVFIDPDSGSVLSTRQMPNKMGRP GNPGSIPPADGADTLPDADDDTPDASPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26870; Mature: 26739
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRMMLLLPLTAGLLAAPALAFAFGPGGDGCGPMGPDRMGGPMGGRGAPIAQMREAANA CCCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH ATLGLAEAVQKARSTAPGTVTLARLSPFAVAAPGADRPSSFADPALKPTYLVSVIEGDTR HHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCE RIVAVDAATGQAAVVGSASGILAYRGGFSGHPGMGGPRHARTPVDLSGAKVTADQAITTA EEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH VEKMGSGKAMMVKGIRRGDDSAWVVAVAPSAADGAATMVFIDPDSGSVLSTRQMPNKMGR HHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHCHHHCCC PGNPGSIPPADGADTLPDADDDTPDASPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRRMMLLLPLTAGLLAAPALAFAFGPGGDGCGPMGPDRMGGPMGGRGAPIAQMREAANA CCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH ATLGLAEAVQKARSTAPGTVTLARLSPFAVAAPGADRPSSFADPALKPTYLVSVIEGDTR HHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCE RIVAVDAATGQAAVVGSASGILAYRGGFSGHPGMGGPRHARTPVDLSGAKVTADQAITTA EEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH VEKMGSGKAMMVKGIRRGDDSAWVVAVAPSAADGAATMVFIDPDSGSVLSTRQMPNKMGR HHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHCHHHCCC PGNPGSIPPADGADTLPDADDDTPDASPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA