| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594242
Identifier: 83594242
GI number: 83594242
Start: 3353608
End: 3354561
Strand: Direct
Name: 83594242
Synonym: Rru_A2910
Alternate gene names: NA
Gene position: 3353608-3354561 (Clockwise)
Preceding gene: 83594241
Following gene: 83594243
Centisome position: 77.04
GC content: 65.41
Gene sequence:
>954_bases ATGACCAGCAGTCGCGTCAATTCCCTCATCGTCGGCGGTTTCGTGCTGATCTTGCTGGGCGGCATCATCGCCGCGGCGAC GATTCTGGCGGGCAAGACCGGTTCGACGGATACCTATTTCACCTCCTATGACAACGTCACCGGCATCAAATACGGCACCC AGGTGCTCTATGAGGGCTATCGCATCGGTCAGGTCGACGAGATCATCCCCGAACAGCGCGCCGAGGGCACCTCGTTCCGC CTGCGTCTGGCGGTGCAAAAGGGCTGGCGCATTCCCGAGGGCAGCCAGACCACCATCGCCACTTCCGGCCTGCTGTCGGC GGTGGCCATCAACATCCGGGGCGGCACCGCAGAAGCGAGCCTGACGCCGGGATCGGAGATTCCGGGCGGCGCTTCGGGCG GCATGTTCGCCGCCATCAACGACCTAGCCTCCGAGGTTGGCACCTTGTCGCGTGACGGGCTCGAACCCTTGGTCGCCAAG CTCAACGCCTATGTCGATACCCTGGGCGGCAGTCTGGCCGATAATCTGCCCGCCATCCTGGGCAATGCCCGCATCACCAG CGAAGCCATCGCCCGCGATCTGCCGCCGATCATCGCCCGCGTCGACCGCTTCACCGCCCGCCTGGATGCCGAGGTCCTGT CGCAAAAAAACATCGACGGCCTCGGCGCCTCGATCGGCAATATCAGCGCCTTTTCCGCCGAGTTGAACGGCCTGGGCCGC GAGCTGCGCCAGACCGGCCAGACCCTGGACGGCATGGTCGCCGGCTCGGCGCCGCTGGTGGATTCGTCGTTGCGCGATCT TCGCTATACGCTTCGCGCCCTGGCGTCGAGCATCGATGCCATTACGTTTAATATGGAGGGGGCCAGCCGCGACATGAAGG AGTTCAGCCGATCGCTCCGGCAGAACCCCGGCGTGCTGCTGCGCGGCAGCGCTCCCGCCGAGGACGGCCGCTAA
Upstream 100 bases:
>100_bases ACGGATCCCGATGATTACCTGCGCCGTTTAACCGAAGGCGGCCGATGACCCGCACCCCGCCCGCTCCCCTTCAAGCCTGG GAAATCCCCGGAGAGTCCCG
Downstream 100 bases:
>100_bases CCGCGCACCGTCCTCTCCGCCCACGCCCGCTTCCCAAGGAGACGTCCATGATCCTCTCGCGCATATCCCGGCCGCTGGCC GCCCTGTTCGCCGCCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mammalian Cell Entry Related Domain Protein; ABC-Type Transport System
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTSSRVNSLIVGGFVLILLGGIIAAATILAGKTGSTDTYFTSYDNVTGIKYGTQVLYEGYRIGQVDEIIPEQRAEGTSFR LRLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAEASLTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAK LNAYVDTLGGSLADNLPAILGNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGR ELRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLRQNPGVLLRGSAPAEDGR
Sequences:
>Translated_317_residues MTSSRVNSLIVGGFVLILLGGIIAAATILAGKTGSTDTYFTSYDNVTGIKYGTQVLYEGYRIGQVDEIIPEQRAEGTSFR LRLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAEASLTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAK LNAYVDTLGGSLADNLPAILGNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGR ELRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLRQNPGVLLRGSAPAEDGR >Mature_316_residues TSSRVNSLIVGGFVLILLGGIIAAATILAGKTGSTDTYFTSYDNVTGIKYGTQVLYEGYRIGQVDEIIPEQRAEGTSFRL RLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAEASLTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAKL NAYVDTLGGSLADNLPAILGNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGRE LRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLRQNPGVLLRGSAPAEDGR
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33120; Mature: 32989
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSRVNSLIVGGFVLILLGGIIAAATILAGKTGSTDTYFTSYDNVTGIKYGTQVLYEGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC RIGQVDEIIPEQRAEGTSFRLRLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAEAS CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHEEEEECCCCCCCC LTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAKLNAYVDTLGGSLADNLPAIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ELRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLR HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHH QNPGVLLRGSAPAEDGR CCCCEEEECCCCCCCCC >Mature Secondary Structure TSSRVNSLIVGGFVLILLGGIIAAATILAGKTGSTDTYFTSYDNVTGIKYGTQVLYEGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHCCC RIGQVDEIIPEQRAEGTSFRLRLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAEAS CCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHEEEEECCCCCCCC LTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAKLNAYVDTLGGSLADNLPAIL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGR CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ELRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLR HHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHH QNPGVLLRGSAPAEDGR CCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA