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The map label for this gene is bkdR [H]

Identifier: 83594238

GI number: 83594238

Start: 3350495

End: 3351001

Strand: Direct

Name: bkdR [H]

Synonym: Rru_A2906

Alternate gene names: 83594238

Gene position: 3350495-3351001 (Clockwise)

Preceding gene: 83594235

Following gene: 83594239

Centisome position: 76.97

GC content: 63.51

Gene sequence:

>507_bases
ATGCCGCAGCCTCACGCCCCGGCCACCCCGCGGTCCCTTGACGCCATCGACCGCAAGATCTTGGCCGAACTGCGCGCCAA
TGCCCGGCTGACGATGAACGATCTGGCCGAGCGGGTGGGATTGTCGTCCTCGCCCTGCTGGAGCCGGGTCAAGCGGCTGG
AGGAAAGCGGGGCGATTCGCGGCTATGTCGCCGTCCTCGACGCCGCCGCCCTCGGATTGGAGATCATCGTCTTCATCGAA
GTCACCCTCGACAAACACGACGACAAAGCGCTCGACCGCTTCGGCGACGCCCTGTCGGCGATGCCGGAAGTGCTGGAAAG
CTATCTGGTGACCGGGGATTACGACTATCTGGTCAAGCTGGCGGTCGCCAGCACCCATCATTACGAGCAATTCCTGCGCG
AAAAGCTCTATCGGATCCAGGGTATCCGCCATACCCGCTCGACCTTCGCCCTGCGCGAACTTAAACGCCTGCTCTCGGTC
GACCCGCTGACCCTACCCTACCCTTGA

Upstream 100 bases:

>100_bases
AAGTCTATGCCGATTTTTTGCGGATTTTCTTCCAAACATTGGGGTTCATCCGGCATAATTCAGAAAATCATCCCGTGAAA
TAATCGTATGGCAGGATCCC

Downstream 100 bases:

>100_bases
AAGAAAGCCGGCCGTTGTTGCGGCGCAAGGATCGGCCTGCCATCGCAGGTTTATCGTTGCGAAAGCGGATCAAGTCCGTC
GGGTATCCACCGCGTGAAGG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPQPHAPATPRSLDAIDRKILAELRANARLTMNDLAERVGLSSSPCWSRVKRLEESGAIRGYVAVLDAAALGLEIIVFIE
VTLDKHDDKALDRFGDALSAMPEVLESYLVTGDYDYLVKLAVASTHHYEQFLREKLYRIQGIRHTRSTFALRELKRLLSV
DPLTLPYP

Sequences:

>Translated_168_residues
MPQPHAPATPRSLDAIDRKILAELRANARLTMNDLAERVGLSSSPCWSRVKRLEESGAIRGYVAVLDAAALGLEIIVFIE
VTLDKHDDKALDRFGDALSAMPEVLESYLVTGDYDYLVKLAVASTHHYEQFLREKLYRIQGIRHTRSTFALRELKRLLSV
DPLTLPYP
>Mature_167_residues
PQPHAPATPRSLDAIDRKILAELRANARLTMNDLAERVGLSSSPCWSRVKRLEESGAIRGYVAVLDAAALGLEIIVFIEV
TLDKHDDKALDRFGDALSAMPEVLESYLVTGDYDYLVKLAVASTHHYEQFLREKLYRIQGIRHTRSTFALRELKRLLSVD
PLTLPYP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=146, Percent_Identity=39.7260273972603, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI87081742, Length=143, Percent_Identity=37.7622377622378, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1790182, Length=143, Percent_Identity=29.3706293706294, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18916; Mature: 18785

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPHAPATPRSLDAIDRKILAELRANARLTMNDLAERVGLSSSPCWSRVKRLEESGAIR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHH
GYVAVLDAAALGLEIIVFIEVTLDKHDDKALDRFGDALSAMPEVLESYLVTGDYDYLVKL
HHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AVASTHHYEQFLREKLYRIQGIRHTRSTFALRELKRLLSVDPLTLPYP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PQPHAPATPRSLDAIDRKILAELRANARLTMNDLAERVGLSSSPCWSRVKRLEESGAIR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHH
GYVAVLDAAALGLEIIVFIEVTLDKHDDKALDRFGDALSAMPEVLESYLVTGDYDYLVKL
HHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AVASTHHYEQFLREKLYRIQGIRHTRSTFALRELKRLLSVDPLTLPYP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]