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The map label for this gene is yfeD [H]

Identifier: 83594224

GI number: 83594224

Start: 3335282

End: 3336139

Strand: Reverse

Name: yfeD [H]

Synonym: Rru_A2892

Alternate gene names: 83594224

Gene position: 3336139-3335282 (Counterclockwise)

Preceding gene: 83594225

Following gene: 83594216

Centisome position: 76.64

GC content: 64.57

Gene sequence:

>858_bases
ATGACCGGATCCTGGCTGGAAACCCTGCTGCTACCCTTTACCGTGCCCTTCCTGCGCGATGCGATGATCATCGCCCTGCT
GGTCGCCGTGCCGACCGCCCTGCTGTCGTGTTTCCTGGTGCTCAAGGGCTGGGCCCTGATGGGCGACGCCATCTCGCATG
CTGTGCTACCCGGGGTGGTTCTGGCCTATGTGGCCGGCCTGCCCTTGGGGGTGGGGGCTTTCGCCGCCGGTCTGGGCTGC
GCCCTGGTGACGGGCTATCTGAAGGATAACAGCCGCATCAAGCAAGACACGGTGATGGGAGTGGTGTTTTCGGGCATGTT
CGGCCTAGGCATCGTGCTCCATACCAGCATCCGCACCGATGTTCACCTTGATCACATCCTGTTTGGCGACATGCTGGGGG
TCGGATCCTCCGATCTGCTGGAAAGCGGCCTGATCGCCCTGCTGGTGGTCGGCGCCATCGCGCTCAAGGGCCGCGACCTG
CTGCTCCACGCCTTTGATCCCCAACAGGCCCGCGCCATCGGCCTGCCTGTCGGCCTGTTGCACTACGGCTTGCTCTGTCT
GCTCGCCCTGACCATCGTCGGCGCCTTGAAGGCGACGGGGATCTTGCTGACCGTCGCCTTGCTGATCGGGCCGGGCGCCA
TCGCCTTTTTGTTCACCCGGCGGTTTTCATCGATGCTGCTGGCCGCCGTGGTGATTTCGAGTCTCGCCTCGGTCCTCGGC
GTCTATATCAGCCTGTTCCTAGACAGCGCCCCGGCGCCGACCATCGTTTTGCTGCTGACCTTGACCTTCATCGCCGCCTT
CATGGTCTCGCGCCAGCGCGACCGCCAACGGGCCCGGGGCGTCGATCGTCCCGTGTGA

Upstream 100 bases:

>100_bases
TTTTGCAGACCCTGGTCTTCCTGCTCGCCTTTTTGTTCGCCCCCAAGCACGGGCTGCTGGCCGCCCGCTTGCGGGGACGC
CGCATGCGGGAGGCCGGCCG

Downstream 100 bases:

>100_bases
GGGCGGGCCGGTGTGAGGGTGGGCTCCTCAGGCGTTGAGCAGGGTTTGGCGGGGATTGGGGCTCCCCCACCAGTCCAAAC
GCCAGATCGCGCCTTGGCGC

Product: ABC-3 transporter component

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTGSWLETLLLPFTVPFLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVVLAYVAGLPLGVGAFAAGLGC
ALVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTDVHLDHILFGDMLGVGSSDLLESGLIALLVVGAIALKGRDL
LLHAFDPQQARAIGLPVGLLHYGLLCLLALTIVGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLG
VYISLFLDSAPAPTIVLLLTLTFIAAFMVSRQRDRQRARGVDRPV

Sequences:

>Translated_285_residues
MTGSWLETLLLPFTVPFLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVVLAYVAGLPLGVGAFAAGLGC
ALVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTDVHLDHILFGDMLGVGSSDLLESGLIALLVVGAIALKGRDL
LLHAFDPQQARAIGLPVGLLHYGLLCLLALTIVGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLG
VYISLFLDSAPAPTIVLLLTLTFIAAFMVSRQRDRQRARGVDRPV
>Mature_284_residues
TGSWLETLLLPFTVPFLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVVLAYVAGLPLGVGAFAAGLGCA
LVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTDVHLDHILFGDMLGVGSSDLLESGLIALLVVGAIALKGRDLL
LHAFDPQQARAIGLPVGLLHYGLLCLLALTIVGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLGV
YISLFLDSAPAPTIVLLLTLTFIAAFMVSRQRDRQRARGVDRPV

Specific function: Part of an ATP-driven transport system yfeABCD for chelated iron [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=244, Percent_Identity=31.1475409836066, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 29893; Mature: 29762

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSWLETLLLPFTVPFLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYVAGLPLGVGAFAAGLGCALVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTD
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VHLDHILFGDMLGVGSSDLLESGLIALLVVGAIALKGRDLLLHAFDPQQARAIGLPVGLL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHH
HYGLLCLLALTIVGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYISLFLDSAPAPTIVLLLTLTFIAAFMVSRQRDRQRARGVDRPV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGSWLETLLLPFTVPFLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYVAGLPLGVGAFAAGLGCALVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTD
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
VHLDHILFGDMLGVGSSDLLESGLIALLVVGAIALKGRDLLLHAFDPQQARAIGLPVGLL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHH
HYGLLCLLALTIVGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYISLFLDSAPAPTIVLLLTLTFIAAFMVSRQRDRQRARGVDRPV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9495751; 11586360; 12142430 [H]