| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594211
Identifier: 83594211
GI number: 83594211
Start: 3316741
End: 3317760
Strand: Reverse
Name: 83594211
Synonym: Rru_A2879
Alternate gene names: NA
Gene position: 3317760-3316741 (Counterclockwise)
Preceding gene: 83594214
Following gene: 83594207
Centisome position: 76.22
GC content: 70.1
Gene sequence:
>1020_bases ATGGCCAAACCCCTGTCCGTCGTTCTTACCCTGGCCAAGCTGGCGGTGTCGGCTGGGATTCTGTGGGTCATCTTTTCTGG CATTGATACGCAGGGGCTCTGGGCGCGGCTTGATCGCGATGTCGCCCTGGTCGGCGGGGTGGCGCTGGTTTTGCTGCAGA TCCAGGCGCTGGGCGGTGGCTGGCGTTGGACGCTGGTGCTGCGCGCCCATGATCGCCGGGTCGGCTTCGCCCAGGCGTGG CGCAATGTGCTGCTGGGGCTGTTCGTCAATCAGGCCATGCCCTCGACCATCGGCGGTGACACTGTCCGGGTGTGGAACGG CACGCGGCTGGGTCTGCCTTTGGGGTTGGCGGCGCGGTCGGTGGTGGTTGATCGCGTCTGCAGCTTTCTGGGGCTTATCT TGCTCTGCGCCCTCGGCCTGCCGGCGCTGCGCCGTCAGGCCAGTGATCCCCTGGTGGCGGCCGGGCTGACCACTTTGGTG ATCGGTGGCCTGTGCTGCCTGGGCGCGCTGCTCGCCCTGCGCTTCCTGCCCGGGGCTGTGGCCCGGGCGCGGGGCGTCGC CCCCTTTGTCGCCCTGTCGCGATCGGCGTGGAGCGTGCTGCTGGGGCGGACCACCGCCTTGCCGATTCTCGGCCTGCTGC TGTTTCCCCACGTCATCGATATCCTCGTCGTCTGGCTGTTCGCCGGGGCCATCGGCTCGCCGGCCACCCTGTGGCAGATC GCCCTGGTGTTTCCGCCGGCCATCCTGGTGGCGGCGGTGCCGCTGTCGATCGCCGGCTGGGGCCTGCGCGAGGGCGCCCT GGTTCTGGGCTTCGCCATCATCGGCCTGCCCGCCGATCAGGCGGTGACCGTGTCCTTGCTGTATGGGCTGTCGGCGGTGA TCACCGGGGTGATCGGCGGCGCGATCTGGGCCTTGGGCGATCGCGATGGCCTGGGGGCCTTGCGCCGGGGCGGGCGCGAG GCCCTGGCTGAAACCCGCGCGCCCGCCGCCCGGGAAAAAGACGCTCAAAGCGGCGGGTGA
Upstream 100 bases:
>100_bases GGCGCGGCGCGAGGCGGGTTGACTCGGCGGGAGCGGCGGATGAGGGTGCGGCCCGGGTCGCCCTCGCCATCCCCTTTCTC TTCGTTGTCCGGAAACGTCC
Downstream 100 bases:
>100_bases TCCGGATCAGAACGCGACGACGATTTGCCTGCCTATCAGGGCAGCGGAACGTCGATCGTCACCGTTTGGCCGTCGCGTCC GGGGAAGGCGCGCAGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAKPLSVVLTLAKLAVSAGILWVIFSGIDTQGLWARLDRDVALVGGVALVLLQIQALGGGWRWTLVLRAHDRRVGFAQAW RNVLLGLFVNQAMPSTIGGDTVRVWNGTRLGLPLGLAARSVVVDRVCSFLGLILLCALGLPALRRQASDPLVAAGLTTLV IGGLCCLGALLALRFLPGAVARARGVAPFVALSRSAWSVLLGRTTALPILGLLLFPHVIDILVVWLFAGAIGSPATLWQI ALVFPPAILVAAVPLSIAGWGLREGALVLGFAIIGLPADQAVTVSLLYGLSAVITGVIGGAIWALGDRDGLGALRRGGRE ALAETRAPAAREKDAQSGG
Sequences:
>Translated_339_residues MAKPLSVVLTLAKLAVSAGILWVIFSGIDTQGLWARLDRDVALVGGVALVLLQIQALGGGWRWTLVLRAHDRRVGFAQAW RNVLLGLFVNQAMPSTIGGDTVRVWNGTRLGLPLGLAARSVVVDRVCSFLGLILLCALGLPALRRQASDPLVAAGLTTLV IGGLCCLGALLALRFLPGAVARARGVAPFVALSRSAWSVLLGRTTALPILGLLLFPHVIDILVVWLFAGAIGSPATLWQI ALVFPPAILVAAVPLSIAGWGLREGALVLGFAIIGLPADQAVTVSLLYGLSAVITGVIGGAIWALGDRDGLGALRRGGRE ALAETRAPAAREKDAQSGG >Mature_338_residues AKPLSVVLTLAKLAVSAGILWVIFSGIDTQGLWARLDRDVALVGGVALVLLQIQALGGGWRWTLVLRAHDRRVGFAQAWR NVLLGLFVNQAMPSTIGGDTVRVWNGTRLGLPLGLAARSVVVDRVCSFLGLILLCALGLPALRRQASDPLVAAGLTTLVI GGLCCLGALLALRFLPGAVARARGVAPFVALSRSAWSVLLGRTTALPILGLLLFPHVIDILVVWLFAGAIGSPATLWQIA LVFPPAILVAAVPLSIAGWGLREGALVLGFAIIGLPADQAVTVSLLYGLSAVITGVIGGAIWALGDRDGLGALRRGGREA LAETRAPAAREKDAQSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35154; Mature: 35023
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPLSVVLTLAKLAVSAGILWVIFSGIDTQGLWARLDRDVALVGGVALVLLQIQALGGG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC WRWTLVLRAHDRRVGFAQAWRNVLLGLFVNQAMPSTIGGDTVRVWNGTRLGLPLGLAARS EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHH VVVDRVCSFLGLILLCALGLPALRRQASDPLVAAGLTTLVIGGLCCLGALLALRFLPGAV HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ARARGVAPFVALSRSAWSVLLGRTTALPILGLLLFPHVIDILVVWLFAGAIGSPATLWQI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALVFPPAILVAAVPLSIAGWGLREGALVLGFAIIGLPADQAVTVSLLYGLSAVITGVIGG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AIWALGDRDGLGALRRGGREALAETRAPAAREKDAQSGG HHHCCCCCCCHHHHHHCCHHHHHHHCCCCHHCCCCCCCC >Mature Secondary Structure AKPLSVVLTLAKLAVSAGILWVIFSGIDTQGLWARLDRDVALVGGVALVLLQIQALGGG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC WRWTLVLRAHDRRVGFAQAWRNVLLGLFVNQAMPSTIGGDTVRVWNGTRLGLPLGLAARS EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEECCCHHHHHHH VVVDRVCSFLGLILLCALGLPALRRQASDPLVAAGLTTLVIGGLCCLGALLALRFLPGAV HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ARARGVAPFVALSRSAWSVLLGRTTALPILGLLLFPHVIDILVVWLFAGAIGSPATLWQI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ALVFPPAILVAAVPLSIAGWGLREGALVLGFAIIGLPADQAVTVSLLYGLSAVITGVIGG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AIWALGDRDGLGALRRGGREALAETRAPAAREKDAQSGG HHHCCCCCCCHHHHHHCCHHHHHHHCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA