| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is flbA [H]
Identifier: 83594186
GI number: 83594186
Start: 3285287
End: 3287044
Strand: Reverse
Name: flbA [H]
Synonym: Rru_A2854
Alternate gene names: 83594186
Gene position: 3287044-3285287 (Counterclockwise)
Preceding gene: 83594187
Following gene: 83594180
Centisome position: 75.52
GC content: 73.44
Gene sequence:
>1758_bases ATGAATCCCCGTCTCGCCCTTGCCTTGAAGCTCCTTGAGGCCGGTCTGGTCGAAAGCGCGGCGATTCCCGTCGCCCAGGC CCTGGAGCGCGATCCCGACGATCCCCGCGCCCACCATCTGGCCGGGCTGATCGCCCGCCGCGGCGGCGATGGGGCCCTGG CCCTAGCGGCCTTTACCCGGGGGCTGGCCGTGGCGGCTGACGATGCGCCGCTGCGGATCGAGCGCGCCGGCCTGCTGCTT GATCTTGGCCGGGCCGAGGAGGCCCTGGCCGATCTGGCGGTGGCCCTGGCCCTGGCCCCCGATCACCAAGCGGTTCTCTC GACCCAGGGGCGGGCCCTGATCGACCTTGGTCGGCCGGGCGAAGCCCTTGCCCCCCTGCGCCGGGCCCGCGCCCTTGCCC CCGACGACGTGGCCCCCGCCCATAACCTGGGGCGGGCCCTGCTGGCCCTGGATCGTCCCGACGAGGCGCTGCCGCTTCTG GAAGCCGCCGTCGCCCGGGCGCCGGGGGCGATCGACCCGCGCGCCGATCTGGCCGAGGCCTTGCGCCGTCTTGATCGGCC GGGCGATGCCGCCCAGCTGTTGCGCGCCGTCCTGGCCGACGCCCCCGGGCGCGCCGATTTGGCCGATGCCCTGGCCGGAG CCCTGTTGGCCGCCGGGGCGGTCGACGAGAGCGTGGCGGTGCTGCGCGCCAGCCTGGACAAGGCGCCGACCCATGGCGCG GGATGGGTCAATCTGGCCGCCGCCCTGATCGAGACCGGCGCCCTGGACGAGGCGACGGCGGCCGCCGACCGGGCCCTGGC CCTTGATCCCGACGATGCCGATGCGAAGGTCAACCGCGCCTTCGCCCGCTGTCTTGCCGATGATTATGAACAGGGGTTCG CCGATTATGCCCATCGCTGGCGCACGGCGGCCTTTCAGCGGCCCTATCCGCCGGTCACGGCGCCGCCATGGGCGGGCGAG CCCTTGGGCGAGGGGACGCTGCTGGTGCGTGGCGAGCAGGGGTTGGGCGATCAGATCATGGCGGCGCGCTTCCTGCCCTG GCTGAGCAAGCGCCCCGATCGTCCGCGGCGGATCGTCTTTGAATGCCACCCCTGCCTGCATCGCTTGCTGGCGGAGGGCC TGGAGGCCGGGATCGACCTTCTGGCCATGGGCCGCCCGCCGCCGCCCGTGGCCGCCTGGATCGGCGCCCTTGATCTTGCC CGCATGGCCGGGGTCACGGCCGGCGTCATGCCCGTGGATGTGCCGTATCTGAAGGCTCGGCCGCCGGTGCCGCCCTTGGC GCCCCCGCTGCCGCCGGGGGGGCGGGGTCGGCTGGGGCTGGTCTGGGCCGGCAAGACCCGGCCGCGCGACCGTTCCTGTC CGCTCGAGCCTTTAGCCGGCCTGTGTGTCGATCAGGGATGGACGGTCCATGCCCTGCAGTTGGGACCGCGCCGCGCCGAT CTGGCCGGTTTGCCCGCCGGCCTGGGAGTGATCGACGAGGGGGACCGGCTGGGCGACATGGCGGCGACGGCGTCGGTGAT GGCCGGGCTTGATCTGGTGGTGGCCGTCGATACGGCGGTGGCCCATCTGGCCGGAGCGCTTGGCCTGCCTTGCGCCCTGC TGCTGCTTGCCACCCCCGACTGGCGGTGGGGGCAAAAGGCGTCGCGCACGGTGTGGTACCCCTCGCTCCGCCTGTTCCGC CAGCCCCATCCCGGCGATTGGGATGGGGCCTTTGATGCGGTGCGGCGAGCCTTCGCCCAAGGCTGGCCGCTTTCATAG
Upstream 100 bases:
>100_bases GGCGGCGCTGGTGCGCCGGGCCGCCGACCTTCCACCGCCAACCAAAGAATGGCATGTGGGCGGTCGAGGAAATGGAAGAC GCCATCGAACCCGTGCTGGG
Downstream 100 bases:
>100_bases AGTGATGCGGATACTCTACAGGTAGCTGACCAGCGACAGCGAGGTGATGCGCGAGAAGGCGGCGAAAGACGCCTGCAGGG CCTGGGCATCGTCGGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MNPRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAADDAPLRIERAGLLL DLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLL EAAVARAPGAIDPRADLAEALRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGA GWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAAFQRPYPPVTAPPWAGE PLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVFECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLA RMAGVTAGVMPVDVPYLKARPPVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRAD LAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFR QPHPGDWDGAFDAVRRAFAQGWPLS
Sequences:
>Translated_585_residues MNPRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAADDAPLRIERAGLLL DLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLL EAAVARAPGAIDPRADLAEALRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGA GWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAAFQRPYPPVTAPPWAGE PLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVFECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLA RMAGVTAGVMPVDVPYLKARPPVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRAD LAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFR QPHPGDWDGAFDAVRRAFAQGWPLS >Mature_585_residues MNPRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAADDAPLRIERAGLLL DLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLL EAAVARAPGAIDPRADLAEALRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGA GWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAAFQRPYPPVTAPPWAGE PLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVFECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLA RMAGVTAGVMPVDVPYLKARPPVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRAD LAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFR QPHPGDWDGAFDAVRRAFAQGWPLS
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI301336134, Length=211, Percent_Identity=26.5402843601896, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI83415184, Length=211, Percent_Identity=26.5402843601896, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI32307148, Length=318, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI32307150, Length=318, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61316; Mature: 61316
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHC GLAVAADDAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPG CCEEECCCCCCEEECCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC EALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEA HHHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHH LRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGA HHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC GWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRW HHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RTAAFQRPYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVF HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE ECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLARMAGVTAGVMPVDVPYLKAR EHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PPVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRAD CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCC LAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPD CCCCCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WRWGQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRAFAQGWPLS CCCCCCCCCEEECCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNPRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHC GLAVAADDAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPG CCEEECCCCCCEEECCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCC EALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEA HHHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHH LRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGA HHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC GWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRW HHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RTAAFQRPYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVF HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE ECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLARMAGVTAGVMPVDVPYLKAR EHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PPVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPLEPLAGLCVDQGWTVHALQLGPRRAD CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCC LAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGALGLPCALLLLATPD CCCCCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WRWGQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRAFAQGWPLS CCCCCCCCCEEECCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]