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The map label for this gene is flgH

Identifier: 83594177

GI number: 83594177

Start: 3276308

End: 3277075

Strand: Direct

Name: flgH

Synonym: Rru_A2845

Alternate gene names: 83594177

Gene position: 3276308-3277075 (Clockwise)

Preceding gene: 83594176

Following gene: 83594178

Centisome position: 75.27

GC content: 62.76

Gene sequence:

>768_bases
ATGCGCCGCCATTCCACTCGAAAGACCGTCGCCAGGGTTGCCGTGGTGGCCTTGGCCGTGGGTGTCCTGGCCGGATGCAA
CACCTTCAAGCGCCTGTCGGAAATCGGCGACGGGCCAGCGATGAGCGGTGTGGACAATCCCACGCTGCGCCCCGATTACC
GGCCCGTCAGCATGCCGATGCCCGCGCCGATGGTCGCCGAGCCCAATCCCAGCAGCCTGTGGGTTCCCGGTGCCCGCTCC
TTCTTCAAGGATCAGCGAGCCGGCGAGGTCGGCGACCTGCTGACCGTCATCGTCGACATCAGCAATGAAAAAGCCACCTT
CGCCAATAACCTGTCGCGCACCAGGGGGAATAAGGAGGGGGCCAATCTCACCAGTTTCCTGGGCTTTGAAGGAACACTGG
CCGATGTTCTGCCCGATGGCGTCGACCCCGCCAGCCTGACCTCCTTCGGCTCGGACAGCAAACATACCGGGAACGGTTCC
ATGGCGCGCTCGGAAACCGTCAGCATGCGGCTGGCCGCCGTTGTTTTGCAGATCCTGCCCAATGGCAATTTCGTCATCGC
CGGCAAGCAGGAGGTCCGGGTCAACGGCGAATTGCGCGAACTGACCGTCACCGGCGTCATCCGACCCGAGGATATCCGTT
CGGACAACACCATCTTCTGGCATCAGATCGCCGAGGCGCGCATCTCCTACGGCGGCCGGGGAACGGTTACCGATATGGTC
GAACCGCGCTATGGCCAGCAGGTTTACGACATCCTCTTCCCCTTCTAA

Upstream 100 bases:

>100_bases
GCGACGAAATCTTAAGTCTGACGCCCTAAGCTGGCCGGGACGACGATACCAGGCTGGCGCCCCGCAAGGCCGGAGCGCCG
CGCCGCACAGGAGAAGACCG

Downstream 100 bases:

>100_bases
TCGGCGGGGTATCACCGTCTCCTTTGGGAAGGGGCGGGCGGACGGCTTGGCTCTAAGCGTGAAATTGGCGCTCGCCATAC
AGCCTTTCTATGGTATCCTC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRRHSTRKTVARVAVVALAVGVLAGCNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPMPAPMVAEPNPSSLWVPGARS
FFKDQRAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEGANLTSFLGFEGTLADVLPDGVDPASLTSFGSDSKHTGNGS
MARSETVSMRLAAVVLQILPNGNFVIAGKQEVRVNGELRELTVTGVIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMV
EPRYGQQVYDILFPF

Sequences:

>Translated_255_residues
MRRHSTRKTVARVAVVALAVGVLAGCNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPMPAPMVAEPNPSSLWVPGARS
FFKDQRAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEGANLTSFLGFEGTLADVLPDGVDPASLTSFGSDSKHTGNGS
MARSETVSMRLAAVVLQILPNGNFVIAGKQEVRVNGELRELTVTGVIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMV
EPRYGQQVYDILFPF
>Mature_255_residues
MRRHSTRKTVARVAVVALAVGVLAGCNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPMPAPMVAEPNPSSLWVPGARS
FFKDQRAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEGANLTSFLGFEGTLADVLPDGVDPASLTSFGSDSKHTGNGS
MARSETVSMRLAAVVLQILPNGNFVIAGKQEVRVNGELRELTVTGVIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMV
EPRYGQQVYDILFPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_RHORT (Q2RQF3)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_427929.1
- STRING:   Q2RQF3
- GeneID:   3836285
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2845
- NMPDR:   fig|1085.1.peg.490
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   SMASANE
- PhylomeDB:   Q2RQF3
- ProtClustDB:   PRK00249
- BioCyc:   RRUB269796:RRU_A2845-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 27551; Mature: 27551

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHSTRKTVARVAVVALAVGVLAGCNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPM
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPMVAEPNPSSLWVPGARSFFKDQRAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEG
CCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCC
ANLTSFLGFEGTLADVLPDGVDPASLTSFGSDSKHTGNGSMARSETVSMRLAAVVLQILP
CCHHHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
NGNFVIAGKQEVRVNGELRELTVTGVIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMV
CCCEEEECCCEEEECCCEEEEEEEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCC
EPRYGQQVYDILFPF
CCCCCHHHHHHHCCC
>Mature Secondary Structure
MRRHSTRKTVARVAVVALAVGVLAGCNTFKRLSEIGDGPAMSGVDNPTLRPDYRPVSMPM
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPMVAEPNPSSLWVPGARSFFKDQRAGEVGDLLTVIVDISNEKATFANNLSRTRGNKEG
CCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCC
ANLTSFLGFEGTLADVLPDGVDPASLTSFGSDSKHTGNGSMARSETVSMRLAAVVLQILP
CCHHHHHCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
NGNFVIAGKQEVRVNGELRELTVTGVIRPEDIRSDNTIFWHQIAEARISYGGRGTVTDMV
CCCEEEECCCEEEECCCEEEEEEEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCC
EPRYGQQVYDILFPF
CCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA