| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594168
Identifier: 83594168
GI number: 83594168
Start: 3268273
End: 3269052
Strand: Reverse
Name: 83594168
Synonym: Rru_A2836
Alternate gene names: NA
Gene position: 3269052-3268273 (Counterclockwise)
Preceding gene: 83594169
Following gene: 83594167
Centisome position: 75.1
GC content: 66.79
Gene sequence:
>780_bases ATGCCCATCGACACCACCTTACGCGGCGCCCTGGACAGGGCGCTCGCGCATTTGCGCAGCCAGGATGGCGCCGACGATCT GGCGGCGCTGTTGGAATCGTTGCGCGACGGCCTGTCGGCGGAAGGGATGGCTCCGGCTGGCGCTCCCCCCTTATCCCCGG TTCCGGTGATGGCTCCGGCGGGCGTCGGTCCGGCGGTGGATGGCCCGGTTCCCCGACCTGGGGCCCATCCCGACGATCGC GTCGCTCTGATCGAAGAGATCCGGGCCCTGTCGACCTTCATCGAGACCGCCCGCAACGATCTGGCGGTGCTGCGCCCGCG CGATATCCAGGAGCGCTTCATTCCGACGGCCTCCGATGAGCTTGACGCCATCGTGCAGTCGACGGAAACCGCGACCCAGG ACATCATGGATGCGGTGGAGGGCCTGGAAGCCCTTGAAGGACGGCTGGAGGGCGAGGATGCCCGGGCTTTGGCCCTGGCG ACCACACGCATCTATGAGGCCTGCACCTTCCAAGACATCACCGGCCAGCGCATCACCAAGGTGGTCCGCACCCTGAAAAG CATCGAAGAACGGGTCGACGCCCTGCTTTCGACCTTCGCCCCCGATGGACTTCTGGGGGACGGCGCGCCGGGAAGCGCCG ATGATCCGGCGCGCTTTCGCCAAACCGCCGCTGCCGTGGGCGACCGGCCCGAAGATATGGCCTTGCTCAATGGTCCGGGA AGCCCCGGGGCGGTGATGAACCAGGACGATATCGACGCCCTGCTCAAGGATTTCGATTAG
Upstream 100 bases:
>100_bases GGATGCCCCCTTCTTCCCTGCCGTGGGGAGGCTGCTTCCGGGCAGGCCGCCAGCGCCGGCGGCCCCGGATTTTGTCGGAC CTGAGCAAGGGACTTCGATC
Downstream 100 bases:
>100_bases CCGCCAGCGTAAGATTTGGCTAAGGCGCGAGAGCGGTCTCTTACGCCATCGCCACCCCGGTGGGCGACTCGCCCGGTCAG GCGGAGGGCCCGCGGGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Chemotaxis Protein; Chemotaxis Protein CheZ; Chemotaxis Phosphatase Chez; Chemotaxis Phosphatase Protein CheZ
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPIDTTLRGALDRALAHLRSQDGADDLAALLESLRDGLSAEGMAPAGAPPLSPVPVMAPAGVGPAVDGPVPRPGAHPDDR VALIEEIRALSTFIETARNDLAVLRPRDIQERFIPTASDELDAIVQSTETATQDIMDAVEGLEALEGRLEGEDARALALA TTRIYEACTFQDITGQRITKVVRTLKSIEERVDALLSTFAPDGLLGDGAPGSADDPARFRQTAAAVGDRPEDMALLNGPG SPGAVMNQDDIDALLKDFD
Sequences:
>Translated_259_residues MPIDTTLRGALDRALAHLRSQDGADDLAALLESLRDGLSAEGMAPAGAPPLSPVPVMAPAGVGPAVDGPVPRPGAHPDDR VALIEEIRALSTFIETARNDLAVLRPRDIQERFIPTASDELDAIVQSTETATQDIMDAVEGLEALEGRLEGEDARALALA TTRIYEACTFQDITGQRITKVVRTLKSIEERVDALLSTFAPDGLLGDGAPGSADDPARFRQTAAAVGDRPEDMALLNGPG SPGAVMNQDDIDALLKDFD >Mature_258_residues PIDTTLRGALDRALAHLRSQDGADDLAALLESLRDGLSAEGMAPAGAPPLSPVPVMAPAGVGPAVDGPVPRPGAHPDDRV ALIEEIRALSTFIETARNDLAVLRPRDIQERFIPTASDELDAIVQSTETATQDIMDAVEGLEALEGRLEGEDARALALAT TRIYEACTFQDITGQRITKVVRTLKSIEERVDALLSTFAPDGLLGDGAPGSADDPARFRQTAAAVGDRPEDMALLNGPGS PGAVMNQDDIDALLKDFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27266; Mature: 27135
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDTTLRGALDRALAHLRSQDGADDLAALLESLRDGLSAEGMAPAGAPPLSPVPVMAPA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GVGPAVDGPVPRPGAHPDDRVALIEEIRALSTFIETARNDLAVLRPRDIQERFIPTASDE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCCCCHH LDAIVQSTETATQDIMDAVEGLEALEGRLEGEDARALALATTRIYEACTFQDITGQRITK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH VVRTLKSIEERVDALLSTFAPDGLLGDGAPGSADDPARFRQTAAAVGDRPEDMALLNGPG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCC SPGAVMNQDDIDALLKDFD CCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PIDTTLRGALDRALAHLRSQDGADDLAALLESLRDGLSAEGMAPAGAPPLSPVPVMAPA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GVGPAVDGPVPRPGAHPDDRVALIEEIRALSTFIETARNDLAVLRPRDIQERFIPTASDE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHCCCCCHH LDAIVQSTETATQDIMDAVEGLEALEGRLEGEDARALALATTRIYEACTFQDITGQRITK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH VVRTLKSIEERVDALLSTFAPDGLLGDGAPGSADDPARFRQTAAAVGDRPEDMALLNGPG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCC SPGAVMNQDDIDALLKDFD CCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA