| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594140
Identifier: 83594140
GI number: 83594140
Start: 3240245
End: 3240775
Strand: Reverse
Name: 83594140
Synonym: Rru_A2808
Alternate gene names: NA
Gene position: 3240775-3240245 (Counterclockwise)
Preceding gene: 83594141
Following gene: 83594139
Centisome position: 74.45
GC content: 60.45
Gene sequence:
>531_bases ATGAAGACCCTTGTTAGCCTAGCGGCCGCCGCCGCCCTTACGCTTGGTGTCGCGGCTTCGGCCAATGCCGAGGAATTCCA GGAATTCCCCATCGGCGAAGCCAAGACGATCAACACCTTGGAAGTCGCCGCGGTTTATCTGAAGCCGATCGACATGGAGC CGCGCGGCATCGATCTGCCCGCCTCCCAGGCCGATATCCATCTCGAAGCCGACATTCACGCCGCCGAAGCCAATCCCAAC GGCTTTGGCGCCGGCGAATGGGTGCCTTACCTCACCGTTTCCTATCGCCTGGAAAACCAGGATACCGGCAAGGTTCTGAC CGGCAATCTGATGCCGATGGTCGCCGTCGACGGGCCCCATTACGGCGCCAACATCAAGATGCCCGGCACCGGCAATTACA AGTTGAGCTACAACATCGACCCGCCGTCGCGTCAGGGCTTCGGCCGTCATACCGATAAGGCGAGCGGCGTCGGTCCGTGG TTCCAGTCTTTCGCCGTTGACTACGAATTCAAGTACGTCCCGCTGAAGTAG
Upstream 100 bases:
>100_bases CGGGTCGGAGGAGCCCGTTAAAAAAAGACTTTAAAACGATAATGCGACTTAATCACCATACCGATGCTCCCGGAGCGGAT CCGGGACCGAAGGAGGATCG
Downstream 100 bases:
>100_bases GACGGCGGACTTCACCTGGGGTGACGCGACCGGATCAGGCAAGGCCCGATCCGGTCGCATCGCTTTTTCAAGGATTGGCG CGGCCTTCGGGATCGATACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKTLVSLAAAAALTLGVAASANAEEFQEFPIGEAKTINTLEVAAVYLKPIDMEPRGIDLPASQADIHLEADIHAAEANPN GFGAGEWVPYLTVSYRLENQDTGKVLTGNLMPMVAVDGPHYGANIKMPGTGNYKLSYNIDPPSRQGFGRHTDKASGVGPW FQSFAVDYEFKYVPLK
Sequences:
>Translated_176_residues MKTLVSLAAAAALTLGVAASANAEEFQEFPIGEAKTINTLEVAAVYLKPIDMEPRGIDLPASQADIHLEADIHAAEANPN GFGAGEWVPYLTVSYRLENQDTGKVLTGNLMPMVAVDGPHYGANIKMPGTGNYKLSYNIDPPSRQGFGRHTDKASGVGPW FQSFAVDYEFKYVPLK >Mature_176_residues MKTLVSLAAAAALTLGVAASANAEEFQEFPIGEAKTINTLEVAAVYLKPIDMEPRGIDLPASQADIHLEADIHAAEANPN GFGAGEWVPYLTVSYRLENQDTGKVLTGNLMPMVAVDGPHYGANIKMPGTGNYKLSYNIDPPSRQGFGRHTDKASGVGPW FQSFAVDYEFKYVPLK
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 18929; Mature: 18929
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLVSLAAAAALTLGVAASANAEEFQEFPIGEAKTINTLEVAAVYLKPIDMEPRGIDLP CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC ASQADIHLEADIHAAEANPNGFGAGEWVPYLTVSYRLENQDTGKVLTGNLMPMVAVDGPH CCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEECCCC YGANIKMPGTGNYKLSYNIDPPSRQGFGRHTDKASGVGPWFQSFAVDYEFKYVPLK CCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHEECEEEEEEECC >Mature Secondary Structure MKTLVSLAAAAALTLGVAASANAEEFQEFPIGEAKTINTLEVAAVYLKPIDMEPRGIDLP CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC ASQADIHLEADIHAAEANPNGFGAGEWVPYLTVSYRLENQDTGKVLTGNLMPMVAVDGPH CCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCEEEEEECCCC YGANIKMPGTGNYKLSYNIDPPSRQGFGRHTDKASGVGPWFQSFAVDYEFKYVPLK CCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]