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The map label for this gene is ybjZ [C]

Identifier: 83594138

GI number: 83594138

Start: 3237384

End: 3238673

Strand: Reverse

Name: ybjZ [C]

Synonym: Rru_A2806

Alternate gene names: 83594138

Gene position: 3238673-3237384 (Counterclockwise)

Preceding gene: 83594139

Following gene: 83594137

Centisome position: 74.4

GC content: 65.5

Gene sequence:

>1290_bases
ATGTTCTTTCACATGCTGCGCCAGTCCTTCCTTGAAGGACGCAAACGCAAGATTTTGGCGGCGGTGACGGTGGCCTTGGC
CGCCACCTTGATCACCACGCTGTTCACCATCTCGCTTGATGTCGGCGACAAGATGGCCCGCGAGATGAAGTCCTATGGCT
CCAACATCCGGGTTGTGCCCAAAAGCGAGGCGGTGCCGCTGCGCATCGGCGGGGTCGATTACAACCCGCTGAAGGGCCGC
GACTATCTTGACGAGGCCGATCTGCCCAAGATGAAGGACATCTTCTGGCGCAATAATATCGTTGGTTTGGCGCCGACGTT
GCGCACCCCGGTACGCCTTGGCGAGGAAAAGGCGGTGTCGCTGATCGGCACCTATTTCGACAAGCCGATGCCCCTGCCCG
ATGATCCCGATTACCGCACCGGCGTGCGCCAGACCAGCGGCTTCTGGAGCGTCGATGGCGCGTGGCCCCAAGATGACGCC
TCTGATCAGGCCTTGGTCGGCGTCACCCTGGCCGGCCGCCTGGGGCTGACCAAGGGCGCCACGGTGAGCGTGGTCGACGA
GGCCACCGGCACAAGCCGGAGCTTCACGGTCAGTGGCCTGCTGACCACCGGCGGGGTCGAGGACGACGCCGTCGTCGTGC
CGTTGGCCGTGGTTCAGGAGATGGCCGGCTTGGCCGGCAAGGTGGCCGAGGTCGAGATCAGCGCCCTGACCATCCCGGAA
AACGAGCTTTCGACCAAGGCGCGGCGCGATACCGAGAAGCTGTCGACCGCCGAATACGACACTTGGTACTGCACCGCCTA
TGTCAGTTCGATCGCCCATCAGATCGAAGAGGCGGTGGTCAACGCCTCGGCCCGGCCGATCTGGCAGGTGGCGGCGGGCG
AGGGGGCGGTGATCGGCAAGATCCAGGCCCTGCTGCTGGTCGTCGGCCTTGCCGCCTTCGTTTCGGCGGCGATGGGGGTG
TCGTCGATGATGAACACGACGATCACCGAGCGCGCCCGCGAGATCGGCCTGATGAAGGCCCTGGGGGCGGCGGGTGGCGA
GATTTATCTGCTGTTTTTGGGCGAGGCGGTGATCGTTGGCGGGATCGGCGGGCTGGTCGGCTGGGGGCTGGGGCTGGGTT
TGGCCCAGGGCGTCGGCCTGATGGTCTTCGGCTCGACCGTTACCATCGCCTGGGTCAGCGGCCCGCTGGTGGTGCTGGTT
TCCATCGCCATGGCCCTGGCCGGATCGGCCCTGCCGGCCCGCGCCATCACCGCCCTGATGCCCGTCGAGGTGCTTCATGG
TCGTCGTTAA

Upstream 100 bases:

>100_bases
GAGTCCTACGATCTGTTCCGCGCCGATCCCGAGAAGTACGTGGGCAACGTTGAAAGTCGTTCCCTGCGCGTCCAGGGCTT
CCAGCCGGTCGAGGGGTGAG

Downstream 100 bases:

>100_bases
GCAAAAGGGACGTTGGGCGATGACGCTACGCCTGCTGGTCAAATCGTTGCTCGGCCCGACTAGCAAGATCGGCGTCGCCC
TGGCCTCGCTGGCGGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFFHMLRQSFLEGRKRKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIRVVPKSEAVPLRIGGVDYNPLKGR
DYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRLGEEKAVSLIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDA
SDQALVGVTLAGRLGLTKGATVSVVDEATGTSRSFTVSGLLTTGGVEDDAVVVPLAVVQEMAGLAGKVAEVEISALTIPE
NELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNASARPIWQVAAGEGAVIGKIQALLLVVGLAAFVSAAMGV
SSMMNTTITERAREIGLMKALGAAGGEIYLLFLGEAVIVGGIGGLVGWGLGLGLAQGVGLMVFGSTVTIAWVSGPLVVLV
SIAMALAGSALPARAITALMPVEVLHGRR

Sequences:

>Translated_429_residues
MFFHMLRQSFLEGRKRKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIRVVPKSEAVPLRIGGVDYNPLKGR
DYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRLGEEKAVSLIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDA
SDQALVGVTLAGRLGLTKGATVSVVDEATGTSRSFTVSGLLTTGGVEDDAVVVPLAVVQEMAGLAGKVAEVEISALTIPE
NELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNASARPIWQVAAGEGAVIGKIQALLLVVGLAAFVSAAMGV
SSMMNTTITERAREIGLMKALGAAGGEIYLLFLGEAVIVGGIGGLVGWGLGLGLAQGVGLMVFGSTVTIAWVSGPLVVLV
SIAMALAGSALPARAITALMPVEVLHGRR
>Mature_429_residues
MFFHMLRQSFLEGRKRKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIRVVPKSEAVPLRIGGVDYNPLKGR
DYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRLGEEKAVSLIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDA
SDQALVGVTLAGRLGLTKGATVSVVDEATGTSRSFTVSGLLTTGGVEDDAVVVPLAVVQEMAGLAGKVAEVEISALTIPE
NELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNASARPIWQVAAGEGAVIGKIQALLLVVGLAAFVSAAMGV
SSMMNTTITERAREIGLMKALGAAGGEIYLLFLGEAVIVGGIGGLVGWGLGLGLAQGVGLMVFGSTVTIAWVSGPLVVLV
SIAMALAGSALPARAITALMPVEVLHGRR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 45249; Mature: 45249

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFHMLRQSFLEGRKRKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIRVVP
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCEEEEE
KSEAVPLRIGGVDYNPLKGRDYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRLGEEKAVS
CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHCCHHHHHH
LIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDASDQALVGVTLAGRLGLTKGA
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCC
TVSVVDEATGTSRSFTVSGLLTTGGVEDDAVVVPLAVVQEMAGLAGKVAEVEISALTIPE
EEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEEEECCC
NELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNASARPIWQVAAGEGAVIGK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
IQALLLVVGLAAFVSAAMGVSSMMNTTITERAREIGLMKALGAAGGEIYLLFLGEAVIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEC
GIGGLVGWGLGLGLAQGVGLMVFGSTVTIAWVSGPLVVLVSIAMALAGSALPARAITALM
CHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHH
PVEVLHGRR
HHHHHCCCC
>Mature Secondary Structure
MFFHMLRQSFLEGRKRKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIRVVP
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCEEEEE
KSEAVPLRIGGVDYNPLKGRDYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRLGEEKAVS
CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHCCHHHHHH
LIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDASDQALVGVTLAGRLGLTKGA
HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCC
TVSVVDEATGTSRSFTVSGLLTTGGVEDDAVVVPLAVVQEMAGLAGKVAEVEISALTIPE
EEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEEEECCC
NELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNASARPIWQVAAGEGAVIGK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
IQALLLVVGLAAFVSAAMGVSSMMNTTITERAREIGLMKALGAAGGEIYLLFLGEAVIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEC
GIGGLVGWGLGLGLAQGVGLMVFGSTVTIAWVSGPLVVLVSIAMALAGSALPARAITALM
CHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHH
PVEVLHGRR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]