| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83594127
Identifier: 83594127
GI number: 83594127
Start: 3229177
End: 3229581
Strand: Reverse
Name: 83594127
Synonym: Rru_A2795
Alternate gene names: NA
Gene position: 3229581-3229177 (Counterclockwise)
Preceding gene: 83594128
Following gene: 83594121
Centisome position: 74.2
GC content: 68.64
Gene sequence:
>405_bases ATGGCCTATATTCACAGCGTGCCCGGTCGGATGCGGGTGAAGTGCAATTCCTTCAAGCGCGACGAGGGCCGCTGTCTGGC CCTACGCCAGGAACTGGCGGCGATCGACGGGGTGGCCGATGTCAGCGTCAATGCCCGCGCCCATAGCCTGATCGTTGTTT ACGATCCGGCCGTGGTCGGGGCCGACCGCCTTTTGCGCCTCTTGCGCGATCGCGGGGTGGCCTGCCAGCCGACTCCGACC GTTGGCCAAAGCCCGGCGCGACGCGGCCGGCCGGTTTCGGTGGCGGTGGTTTCGGGGGCAGCGGCGGCTTTTGGCGGGGC TTTCGGGCGGGCGGTGTTCGGCGCGGTGCTCAAATCCAGCCTGGAACGCGGCGTCGCCAGCTTGGTGAGCGCCGCCATCC GTTAG
Upstream 100 bases:
>100_bases GGTTATCAAAGGTGATGGGCGGGGGTCTTTCCCCTACGCCGTGAAGGCGCGAGTTATTATCATCCGCACCCAAAGCTCAC AACTCTGCGGGGATGACCTC
Downstream 100 bases:
>100_bases AGCGATGCTGTCTCGCCGCCCTTATGCCGATTGGTCGCTGGCCAGTCGGCTGGGCAGGGGGGCGAGTTGGTCCTTGTATT TGGCGGTCGGGCTGGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAYIHSVPGRMRVKCNSFKRDEGRCLALRQELAAIDGVADVSVNARAHSLIVVYDPAVVGADRLLRLLRDRGVACQPTPT VGQSPARRGRPVSVAVVSGAAAAFGGAFGRAVFGAVLKSSLERGVASLVSAAIR
Sequences:
>Translated_134_residues MAYIHSVPGRMRVKCNSFKRDEGRCLALRQELAAIDGVADVSVNARAHSLIVVYDPAVVGADRLLRLLRDRGVACQPTPT VGQSPARRGRPVSVAVVSGAAAAFGGAFGRAVFGAVLKSSLERGVASLVSAAIR >Mature_133_residues AYIHSVPGRMRVKCNSFKRDEGRCLALRQELAAIDGVADVSVNARAHSLIVVYDPAVVGADRLLRLLRDRGVACQPTPTV GQSPARRGRPVSVAVVSGAAAAFGGAFGRAVFGAVLKSSLERGVASLVSAAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13982; Mature: 13851
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYIHSVPGRMRVKCNSFKRDEGRCLALRQELAAIDGVADVSVNARAHSLIVVYDPAVVG CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCEEEEEEEECCCHHC ADRLLRLLRDRGVACQPTPTVGQSPARRGRPVSVAVVSGAAAAFGGAFGRAVFGAVLKSS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH LERGVASLVSAAIR HHHHHHHHHHHHCC >Mature Secondary Structure AYIHSVPGRMRVKCNSFKRDEGRCLALRQELAAIDGVADVSVNARAHSLIVVYDPAVVG CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCEEEEEEEECCCHHC ADRLLRLLRDRGVACQPTPTVGQSPARRGRPVSVAVVSGAAAAFGGAFGRAVFGAVLKSS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH LERGVASLVSAAIR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA