Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is hcp

Identifier: 83594091

GI number: 83594091

Start: 3190931

End: 3192580

Strand: Reverse

Name: hcp

Synonym: Rru_A2759

Alternate gene names: 83594091

Gene position: 3192580-3190931 (Counterclockwise)

Preceding gene: 83594092

Following gene: 83594088

Centisome position: 73.35

GC content: 67.15

Gene sequence:

>1650_bases
ATGTATTGCTACCAATGTGAACAGACGGCCCAGGGTGTGGCCTGTGTCACCGTCGGCCTCTGTGGCAAGACGGCCGAGGT
CGCCGCCCTGCAGGATCTGCTGATCGAGGCGGCCAAGGGCCTGTCGCAATATGCCTACCGCCTGCGCCAGCTGGGGATCG
CTCTGCCCGAGATCGACGCCTTCGTGCTCGATGCGCTGTTCACCACCGTCACCAATGTCAGCTTCGATCCGGCCCGGCTG
GAGGAGCAACTGCGCGAGGCCGCCTGTTTGCGCGATCAGCTCCGGGCCCGCTACGATGCAGCCTGCGCCGCCCGTCACAC
ATCTCCCGAAACCCTGAGCGGCCCCGCCCTGTGGCAGCCGGCCTCGACGCGGGCCGGTTTGGTCGGCACTGGCGAGGCGG
CGTCGATCGCCCATCGCCTGACGGCGCAAGGCGCCGATCTGACCGGCTTGCAGGACCTGTTGCTCTATGGGGTGAAGGGC
ATGGCCGCCTATGCCTGCCACGCCCGTATCCTGGGGCAGACCGACGAGAGCGTGGCGGCCTTCGTTCACGAGGTGTTGAC
CACCCTGGCCGAGGTTCCCGCCGATGCCGAGGCCCTGCTTGGGCTGGTGCTGCGCTGTGGCACGGTGTCGCTGACGGTGC
TTGATCTGCTTGATCGGGCCAATACGGGCGCCTATGGCGATCCGCAGCCGACGCCGGTTCTGATGGGCCATCGCGCCGGC
AAGGCGATCTTGGTCTCGGGCCATGACCTCAAGGATCTTGCCGTTCTTCTCGAGCAAACCGTCGGTCTGGGGGTCGATAT
CTATACCCACGGCGAGATGCTGCCGGCGCATGGCTATCCCGAACTGAAGAAGTATCCCCATCTGGTCGGCCATTACGGCG
GGGCTTGGCAGCGCCAGCGCAGCGAGTTCGCCGCCTTCCCCGGGCCGATCCTGATGACCACCAACTGCATCCAGAACCCG
ACGGCGGCCTATCGGGATCGGCTGTTCACCTGTGGGCTGGTCGCCCATCCGGAGGCGACGGCGCTGTCGGGGCGGAATTT
CGCGCCGCTGATCGCCAGCGCCCTGGCCGCGCCCGGCTTTGCCGAGGATGGCCCGGTCCGTCACCATTTGGCCGGCTTCG
GTCACAAGGCGGTGCTGGGCGTCGCCCCGCAGATCATCGACGCGGTCAAGGCCGGCGCCATCCGCCGCTTCGTGCTGATC
GGCGGCTGCGACGGCCATGAATCCGCCCGGTCCTATTTCGACGATCTCGCCGGCTCGCTGCCCCAGGACGCGGTGGTGTT
GACGCTGGGCTGCGGCAAGTTCCGGGTGATCGATCACGATATGGGCACCATCGCCGGCCTGCCGCGCCTGCTCGATATGG
GCCAGTGCAACGACGCCTATTCGGCGATCAAGGTTGCCCAGGCCCTGGCCGAGGCCTTTGGCGTCGGCGTCAACGACCTG
CCGCTGTCGCTGGTGCTGTCATGGTTCGAGCAGAAGGCGGTCACCGTGCTGCTGGCGCTGCTCGCCCTTGGGGTGAGGAA
CATTCGCCTGGGGCCGAACCTGCCGGCTTTCATCACCCCGCCGGTGCTCAAGGTGCTGGTCGATCGCTTCGGCATCATGC
CCGTCGGCACGGTTGCCGAGGATCTGGCGGCGATGGGGTTGGCCGCCTAA

Upstream 100 bases:

>100_bases
TGACCATCGTCAAGGTCGCTCGGGGACTTTGCTGTCGTTCTGATACCGACAATTTCCGCAGGGGTTTGGCGCCCCGTCCC
GGTCGCGAAGGATCTGAACG

Downstream 100 bases:

>100_bases
GGCACCGGGGTCATAAGCCGGGACGGCCCGCAAGGGCCGTCTTTCGGCCCCCCTTACTTCGCCAAGACCTTGTCGACGGC
GGCCAGGAGTTCGGCCTTTT

Product: hydroxylamine reductase

Products: NA

Alternate protein names: Hybrid-cluster protein; HCP

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL
EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG
MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG
KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP
TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI
GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL
PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA

Sequences:

>Translated_549_residues
MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL
EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG
MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG
KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP
TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI
GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL
PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA
>Mature_549_residues
MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL
EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG
MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG
KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP
TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI
GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL
PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA

Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HCP family

Homologues:

Organism=Escherichia coli, GI87081794, Length=551, Percent_Identity=48.2758620689655, Blast_Score=497, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HCP_RHORT (Q2RQN9)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_427843.1
- HSSP:   Q01770
- ProteinModelPortal:   Q2RQN9
- SMR:   Q2RQN9
- STRING:   Q2RQN9
- GeneID:   3836198
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A2759
- NMPDR:   fig|1085.1.peg.407
- eggNOG:   COG1151
- HOGENOM:   HBG294215
- OMA:   NAITHEA
- PhylomeDB:   Q2RQN9
- ProtClustDB:   PRK05290
- BioCyc:   RRUB269796:RRU_A2759-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00069
- InterPro:   IPR010048
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099
- InterPro:   IPR016100
- Gene3D:   G3DSA:3.40.50.2030
- Gene3D:   G3DSA:1.20.1270.20
- PIRSF:   PIRSF000076
- TIGRFAMs:   TIGR01703

Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like

EC number: NA

Molecular weight: Translated: 57950; Mature: 57950

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDA
CCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FVLDALFTTVTNVSFDPARLEEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKGMAAYACHARILGQTDESVAA
CCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQR
CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCHHHHHH
SEFAAFPGPILMTTNCIQNPTAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGF
HHHHCCCCCCEEECHHHCCCHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCCC
AEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLIGGCDGHESARSYFDDLAGSL
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCC
PQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL
CCCCEEEEECCCEEEEEECCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
DLAAMGLAA
HHHHHCCCC
>Mature Secondary Structure
MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDA
CCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FVLDALFTTVTNVSFDPARLEEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKGMAAYACHARILGQTDESVAA
CCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQR
CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCHHHHHH
SEFAAFPGPILMTTNCIQNPTAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGF
HHHHCCCCCCEEECHHHCCCHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCCC
AEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLIGGCDGHESARSYFDDLAGSL
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCC
PQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL
CCCCEEEEECCCEEEEEECCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
DLAAMGLAA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA