| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hcp
Identifier: 83594091
GI number: 83594091
Start: 3190931
End: 3192580
Strand: Reverse
Name: hcp
Synonym: Rru_A2759
Alternate gene names: 83594091
Gene position: 3192580-3190931 (Counterclockwise)
Preceding gene: 83594092
Following gene: 83594088
Centisome position: 73.35
GC content: 67.15
Gene sequence:
>1650_bases ATGTATTGCTACCAATGTGAACAGACGGCCCAGGGTGTGGCCTGTGTCACCGTCGGCCTCTGTGGCAAGACGGCCGAGGT CGCCGCCCTGCAGGATCTGCTGATCGAGGCGGCCAAGGGCCTGTCGCAATATGCCTACCGCCTGCGCCAGCTGGGGATCG CTCTGCCCGAGATCGACGCCTTCGTGCTCGATGCGCTGTTCACCACCGTCACCAATGTCAGCTTCGATCCGGCCCGGCTG GAGGAGCAACTGCGCGAGGCCGCCTGTTTGCGCGATCAGCTCCGGGCCCGCTACGATGCAGCCTGCGCCGCCCGTCACAC ATCTCCCGAAACCCTGAGCGGCCCCGCCCTGTGGCAGCCGGCCTCGACGCGGGCCGGTTTGGTCGGCACTGGCGAGGCGG CGTCGATCGCCCATCGCCTGACGGCGCAAGGCGCCGATCTGACCGGCTTGCAGGACCTGTTGCTCTATGGGGTGAAGGGC ATGGCCGCCTATGCCTGCCACGCCCGTATCCTGGGGCAGACCGACGAGAGCGTGGCGGCCTTCGTTCACGAGGTGTTGAC CACCCTGGCCGAGGTTCCCGCCGATGCCGAGGCCCTGCTTGGGCTGGTGCTGCGCTGTGGCACGGTGTCGCTGACGGTGC TTGATCTGCTTGATCGGGCCAATACGGGCGCCTATGGCGATCCGCAGCCGACGCCGGTTCTGATGGGCCATCGCGCCGGC AAGGCGATCTTGGTCTCGGGCCATGACCTCAAGGATCTTGCCGTTCTTCTCGAGCAAACCGTCGGTCTGGGGGTCGATAT CTATACCCACGGCGAGATGCTGCCGGCGCATGGCTATCCCGAACTGAAGAAGTATCCCCATCTGGTCGGCCATTACGGCG GGGCTTGGCAGCGCCAGCGCAGCGAGTTCGCCGCCTTCCCCGGGCCGATCCTGATGACCACCAACTGCATCCAGAACCCG ACGGCGGCCTATCGGGATCGGCTGTTCACCTGTGGGCTGGTCGCCCATCCGGAGGCGACGGCGCTGTCGGGGCGGAATTT CGCGCCGCTGATCGCCAGCGCCCTGGCCGCGCCCGGCTTTGCCGAGGATGGCCCGGTCCGTCACCATTTGGCCGGCTTCG GTCACAAGGCGGTGCTGGGCGTCGCCCCGCAGATCATCGACGCGGTCAAGGCCGGCGCCATCCGCCGCTTCGTGCTGATC GGCGGCTGCGACGGCCATGAATCCGCCCGGTCCTATTTCGACGATCTCGCCGGCTCGCTGCCCCAGGACGCGGTGGTGTT GACGCTGGGCTGCGGCAAGTTCCGGGTGATCGATCACGATATGGGCACCATCGCCGGCCTGCCGCGCCTGCTCGATATGG GCCAGTGCAACGACGCCTATTCGGCGATCAAGGTTGCCCAGGCCCTGGCCGAGGCCTTTGGCGTCGGCGTCAACGACCTG CCGCTGTCGCTGGTGCTGTCATGGTTCGAGCAGAAGGCGGTCACCGTGCTGCTGGCGCTGCTCGCCCTTGGGGTGAGGAA CATTCGCCTGGGGCCGAACCTGCCGGCTTTCATCACCCCGCCGGTGCTCAAGGTGCTGGTCGATCGCTTCGGCATCATGC CCGTCGGCACGGTTGCCGAGGATCTGGCGGCGATGGGGTTGGCCGCCTAA
Upstream 100 bases:
>100_bases TGACCATCGTCAAGGTCGCTCGGGGACTTTGCTGTCGTTCTGATACCGACAATTTCCGCAGGGGTTTGGCGCCCCGTCCC GGTCGCGAAGGATCTGAACG
Downstream 100 bases:
>100_bases GGCACCGGGGTCATAAGCCGGGACGGCCCGCAAGGGCCGTCTTTCGGCCCCCCTTACTTCGCCAAGACCTTGTCGACGGC GGCCAGGAGTTCGGCCTTTT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA
Sequences:
>Translated_549_residues MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA >Mature_549_residues MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDAFVLDALFTTVTNVSFDPARL EEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQPASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKG MAAYACHARILGQTDESVAAFVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQRSEFAAFPGPILMTTNCIQNP TAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGFAEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLI GGCDGHESARSYFDDLAGSLPQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAEDLAAMGLAA
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family
Homologues:
Organism=Escherichia coli, GI87081794, Length=551, Percent_Identity=48.2758620689655, Blast_Score=497, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCP_RHORT (Q2RQN9)
Other databases:
- EMBL: CP000230 - RefSeq: YP_427843.1 - HSSP: Q01770 - ProteinModelPortal: Q2RQN9 - SMR: Q2RQN9 - STRING: Q2RQN9 - GeneID: 3836198 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A2759 - NMPDR: fig|1085.1.peg.407 - eggNOG: COG1151 - HOGENOM: HBG294215 - OMA: NAITHEA - PhylomeDB: Q2RQN9 - ProtClustDB: PRK05290 - BioCyc: RRUB269796:RRU_A2759-MONOMER - GO: GO:0005737 - HAMAP: MF_00069 - InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 - Gene3D: G3DSA:3.40.50.2030 - Gene3D: G3DSA:1.20.1270.20 - PIRSF: PIRSF000076 - TIGRFAMs: TIGR01703
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: NA
Molecular weight: Translated: 57950; Mature: 57950
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDA CCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FVLDALFTTVTNVSFDPARLEEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKGMAAYACHARILGQTDESVAA CCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQR CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCHHHHHH SEFAAFPGPILMTTNCIQNPTAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGF HHHHCCCCCCEEECHHHCCCHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCCC AEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLIGGCDGHESARSYFDDLAGSL CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCC PQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL CCCCEEEEECCCEEEEEECCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAE HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH DLAAMGLAA HHHHHCCCC >Mature Secondary Structure MYCYQCEQTAQGVACVTVGLCGKTAEVAALQDLLIEAAKGLSQYAYRLRQLGIALPEIDA CCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FVLDALFTTVTNVSFDPARLEEQLREAACLRDQLRARYDAACAARHTSPETLSGPALWQP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASTRAGLVGTGEAASIAHRLTAQGADLTGLQDLLLYGVKGMAAYACHARILGQTDESVAA CCCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FVHEVLTTLAEVPADAEALLGLVLRCGTVSLTVLDLLDRANTGAYGDPQPTPVLMGHRAG HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC KAILVSGHDLKDLAVLLEQTVGLGVDIYTHGEMLPAHGYPELKKYPHLVGHYGGAWQRQR CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCHHHHCCCCHHHHHH SEFAAFPGPILMTTNCIQNPTAAYRDRLFTCGLVAHPEATALSGRNFAPLIASALAAPGF HHHHCCCCCCEEECHHHCCCHHHHHHHHHCCCEEECCCHHHCCCCCCHHHHHHHHCCCCC AEDGPVRHHLAGFGHKAVLGVAPQIIDAVKAGAIRRFVLIGGCDGHESARSYFDDLAGSL CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCC PQDAVVLTLGCGKFRVIDHDMGTIAGLPRLLDMGQCNDAYSAIKVAQALAEAFGVGVNDL CCCCEEEEECCCEEEEEECCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH PLSLVLSWFEQKAVTVLLALLALGVRNIRLGPNLPAFITPPVLKVLVDRFGIMPVGTVAE HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH DLAAMGLAA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA