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The map label for this gene is pdtaS [H]

Identifier: 83594084

GI number: 83594084

Start: 3184877

End: 3186001

Strand: Reverse

Name: pdtaS [H]

Synonym: Rru_A2752

Alternate gene names: 83594084

Gene position: 3186001-3184877 (Counterclockwise)

Preceding gene: 83594085

Following gene: 83594083

Centisome position: 73.19

GC content: 66.58

Gene sequence:

>1125_bases
GTGCGGCTGAAATGGCCCGCCGCCTGTCCCTTGGCGGCTGAAGGCCCGATTCGGAAGGCCCCGATGACCAGCGCCCAAGC
CTTTGCCCAGATTGAAGACGGCGTCGCTTTCGCCCAGGCGATCGTCGATACCATCCGCGAACCTTTGCTGGTGCTCGACA
AGGATCTCCGCGTCGTCTGCGCGAGCCGGGCGTTTTATCAGACCTTCAAGCTCCGCCCCGAAGACGTGGCGGGCTGTCCC
CTGTACCGGGTGGGGGAGGGGCAGTGGAACATCCCCGAATTGCGCGTGCTTCTGGAAACCATCTTGCCCCAGCACGCGGT
GATGGACGCCTATGAGATCGATCACGATTTCGGCGAAAGCGGCCGTCGCACCATGGTGCTGAACGCGCGCACCGTGGTCG
AGAAGGGCAAGGGCGAGCGGTTGATTTTGCTGGCGATGGAAGATGTCACCGTGCAGCGCGCCGCCGAGGCGGCGATGCGC
GATCTGCTCGCCGAAAAGGACGTGTTGCTTCAGGAAATGCGCCATCGGGTCGGCAATAGCCTGCAGCTGATCGCCAGTAT
CCTGATGATGAAGGCGCGCGCCGTCAGCTCGGAGGAAGCCCGCCACCACCTGCAAGACGCCCATCAGCGCATCCTGTCGA
TCGCCGCCGCCCAGCAACAGCTTCAGGCCTCGCGCCCCGGCGAGGCGATCGCCCTCGCCCCCTATCTGGGCCGGTTGTGC
GAAACCCTGACCGCGACGCTGATCGGCGATGCCCGCCCCATCGTCGTCAAGGTCGAGGCCGTGGGCTCGGCGCCGTCGAA
CGAGGCGGCGAGCCTGGGCTTGATCGTGACCGAACTGGTGATCAACGCCCTGAAGCACGCCTTCCGGGCCGATGCCACCG
CCGGCGAGATCCTGGTCGCCTATGAAAGCGCCGCCGACGGCGCTTGGCGGCTTTCGGTCACCGATAATGGCGTCGGCACG
CCGACCGAAAGCGCCGCCAAGGTCACCCCCGGGCTGGGTACCAGCATCATCCGGGCGCTGGGGCATCAGCTTGACGCCCG
GATCGAGAGCGTCGGCGGTCCGCGGGGAACGCGGGTTTCGCTGACCCATGGCGCCTTCGCTCCGCCGACGGTTGCGGCAT
CCTGA

Upstream 100 bases:

>100_bases
GGTCAGTAGCATCTGAGGCCACCGCCGCCGGCCGGAAGCGGCGGTGCGCAGTCGACCACCGACGAATTTTGGAGAGATGG
TCGGGACCTCTTGGGGTATT

Downstream 100 bases:

>100_bases
TCCGATTTCGGTTGCGCCTATTCGGTCTTTCTCGGTTCGGTGGAGTTTGCGCCGCCGATGGCTTATCGTCGCCTGCGCCC
TCGCAAGCAAAAAGGTAAGG

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRLKWPAACPLAAEGPIRKAPMTSAQAFAQIEDGVAFAQAIVDTIREPLLVLDKDLRVVCASRAFYQTFKLRPEDVAGCP
LYRVGEGQWNIPELRVLLETILPQHAVMDAYEIDHDFGESGRRTMVLNARTVVEKGKGERLILLAMEDVTVQRAAEAAMR
DLLAEKDVLLQEMRHRVGNSLQLIASILMMKARAVSSEEARHHLQDAHQRILSIAAAQQQLQASRPGEAIALAPYLGRLC
ETLTATLIGDARPIVVKVEAVGSAPSNEAASLGLIVTELVINALKHAFRADATAGEILVAYESAADGAWRLSVTDNGVGT
PTESAAKVTPGLGTSIIRALGHQLDARIESVGGPRGTRVSLTHGAFAPPTVAAS

Sequences:

>Translated_374_residues
MRLKWPAACPLAAEGPIRKAPMTSAQAFAQIEDGVAFAQAIVDTIREPLLVLDKDLRVVCASRAFYQTFKLRPEDVAGCP
LYRVGEGQWNIPELRVLLETILPQHAVMDAYEIDHDFGESGRRTMVLNARTVVEKGKGERLILLAMEDVTVQRAAEAAMR
DLLAEKDVLLQEMRHRVGNSLQLIASILMMKARAVSSEEARHHLQDAHQRILSIAAAQQQLQASRPGEAIALAPYLGRLC
ETLTATLIGDARPIVVKVEAVGSAPSNEAASLGLIVTELVINALKHAFRADATAGEILVAYESAADGAWRLSVTDNGVGT
PTESAAKVTPGLGTSIIRALGHQLDARIESVGGPRGTRVSLTHGAFAPPTVAAS
>Mature_374_residues
MRLKWPAACPLAAEGPIRKAPMTSAQAFAQIEDGVAFAQAIVDTIREPLLVLDKDLRVVCASRAFYQTFKLRPEDVAGCP
LYRVGEGQWNIPELRVLLETILPQHAVMDAYEIDHDFGESGRRTMVLNARTVVEKGKGERLILLAMEDVTVQRAAEAAMR
DLLAEKDVLLQEMRHRVGNSLQLIASILMMKARAVSSEEARHHLQDAHQRILSIAAAQQQLQASRPGEAIALAPYLGRLC
ETLTATLIGDARPIVVKVEAVGSAPSNEAASLGLIVTELVINALKHAFRADATAGEILVAYESAADGAWRLSVTDNGVGT
PTESAAKVTPGLGTSIIRALGHQLDARIESVGGPRGTRVSLTHGAFAPPTVAAS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 40103; Mature: 40103

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKWPAACPLAAEGPIRKAPMTSAQAFAQIEDGVAFAQAIVDTIREPLLVLDKDLRVVC
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ASRAFYQTFKLRPEDVAGCPLYRVGEGQWNIPELRVLLETILPQHAVMDAYEIDHDFGES
HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
GRRTMVLNARTVVEKGKGERLILLAMEDVTVQRAAEAAMRDLLAEKDVLLQEMRHRVGNS
CCEEEEEEHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LQLIASILMMKARAVSSEEARHHLQDAHQRILSIAAAQQQLQASRPGEAIALAPYLGRLC
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
ETLTATLIGDARPIVVKVEAVGSAPSNEAASLGLIVTELVINALKHAFRADATAGEILVA
HHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YESAADGAWRLSVTDNGVGTPTESAAKVTPGLGTSIIRALGHQLDARIESVGGPRGTRVS
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTHGAFAPPTVAAS
ECCCCCCCCCCCCC
>Mature Secondary Structure
MRLKWPAACPLAAEGPIRKAPMTSAQAFAQIEDGVAFAQAIVDTIREPLLVLDKDLRVVC
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ASRAFYQTFKLRPEDVAGCPLYRVGEGQWNIPELRVLLETILPQHAVMDAYEIDHDFGES
HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
GRRTMVLNARTVVEKGKGERLILLAMEDVTVQRAAEAAMRDLLAEKDVLLQEMRHRVGNS
CCEEEEEEHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LQLIASILMMKARAVSSEEARHHLQDAHQRILSIAAAQQQLQASRPGEAIALAPYLGRLC
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
ETLTATLIGDARPIVVKVEAVGSAPSNEAASLGLIVTELVINALKHAFRADATAGEILVA
HHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
YESAADGAWRLSVTDNGVGTPTESAAKVTPGLGTSIIRALGHQLDARIESVGGPRGTRVS
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTHGAFAPPTVAAS
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]