| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is zraS [C]
Identifier: 83594057
GI number: 83594057
Start: 3150536
End: 3153040
Strand: Direct
Name: zraS [C]
Synonym: Rru_A2725
Alternate gene names: 83594057
Gene position: 3150536-3153040 (Clockwise)
Preceding gene: 83594056
Following gene: 83594058
Centisome position: 72.38
GC content: 66.39
Gene sequence:
>2505_bases ATGCCGACCGTGGACCCGGAACGCCTGAAAGGCGATACACTGGATCTTGCCAGCATCGGCCGCGACTTCGTCATCGGGCT TAGCCTTATGGTCGTCGTCATGCTGGCGCTGGCGATCCCGACCATCCTTGATCGCCCCCTCCCCGATGCCGTCGTTCTGG CCATCCTGATCCCGGGTCTGGCCCTGGTCCTGCTGTTGATCCGCCGCCAACGCACCCTGTTCAAGGCGATCGACCGATCG GGGCGCCGGCTTGCCGATAGCGAAGCCCGGATCCGCGACTTCGCCCAATCGAGTTCCGACTGGTTCTGGGAAACCGGCCC GACCCTGGCCTATACCTACGCCTCGCCCCGCCTGCTCGACCTGAGCGGCAACGATCCCGCCAAGATCATGGGCCAAAGGC TGAGCGATCTTTGCCCGGATCCGCGCTCGGACGCCGCCGAACGCATCGCCACCCGCCGACCCTTTCGCGATCTGGCGCTG ACCGTCGATCTGGGAGACGGCTATCGTCGTCATTTCCGTCTGGCCGGCCGACCGGTGCTCGATGATCGGGGCGTCTTCGC CGGCTATCGGGGCGCCGGCGTCGATGTCACGGGCGAAATCGCCGCCAGCGCCCGCTCCGAGGCCTTGCGCGACCTGATGT TCGACGCCGTCGACAGCATTTCCGAGGGCTTCGTGCTGTTCGACCCGGAAGGCCGGCTGGTGGTGGTCAACGACAGCTAC CGTTATGCCTATCCGCAATTGGCCGATCATCTGGTTCCGGGCATCACCTTTGAAGAATTGCTGAAAGTGGCCGCCCGCGG CCGTGACCTGGGCGCCGAGAAAGACCTGCGCGGCTGGATCGACGAGCGCCTGCACCGCCACCGCGAGGGCGGAACGAACG ATTGCAAGTTATCGGACGGCCGCTGGTATCGGATCGGCGAGCATGAGACCCGGGGGGGCGGCTTGGTCAAGGTGTTGATG GACATCACCGAGATGAAGACCGGCGCCGATCGTCTGGCCCAGCAAACCGCCCTGTTGCGCACCTTCGTCGATGAAACCCC GGTGGCCGTCGCCATGGTCGATGCCACGTTACGCTATCTGCGGGTCAGCCGGCGCTGGCGGACGGAATTCGGTCTGGAGG ACCGCGACATCATCGGCCAACGCCACGACGTAGTCATGCCCTCGCTGCCCGATGATTGGCTCAATGATTACGAACAGGCG CTTTCGGGTGTCGCCATCGAACGCGAGGAGGTCTCGATCGATCTGGGCGGGCGGACCTTGTGGCTGCGCCGCCGCGAATA TCCCTGGTTCCTCGAGGACGGCACGGTCGGCGGCTTGATGATGACGGCCGAGAACATCACCGAGCGCAAACAGGCCGAAC TGGCCTTGCTGCAATCCCAGAAGATGGAGGCCGTTGGCCAGCTTGCCGGCGGCATCGCCCATGAATTCAATAACATGCTG ACCTCGATCGGCGGCTTCGCCCGCATGGCCCAGCGCACGCCCGAGCGCTTGGAGCGCGTCACCATGTGTCTGGCCGAGGT GGTGCGCTCGGCCGATCGCGCCGCCGGGCTGACCAGCCAGCTTTTGAACTTCAGCCGGCGCACCACCGAAGAGGAAACCC TGCGCATTCCGCTGGGCGCCCTGCTTGATGAATTGCGCACCTTCCTGAAGCCGGTGCTGGGCGAACGCATCGCCTTGGAC CTGCGCTGCGCCGTCGAGTCCTTGTTTGTTCTCGCCAACCGCGACCGGCTGCATCAGGCCCTGGTCAATCTGTGCATCAA CGCCCGCGACGCCATGGCCGAGGGCGGAACCGTCATCATCGAGACCGGACACGGCGTGCCCCCTGAGCGCCTGCGCTGTC GCCACCCCCATCTGGGCGCCGGCCAGCATGCGGTGCTGCGGGTCATCGATTCGGGCTGTGGCATTCCCGAAGAGGATCTG CCCCGCGTCTTCGAGCCCTTCTTCACCACCAAGGCCCAGGGCAAGGGCACCGGTCTTGGCCTGCCGATGGTCTATGCCAT GGCCGAACAGGCCAATGGCGCGGTGGAACTCGACTCGATCGTCGGTCGGGGGACGACGGTGACCCTCTATCTGCCCTTGG CCGATGGCGCCGCCGCGGCGCCGACCATCGAAGGGCCGCCGCCCCTCCCGCGTGGCGGGGCGCGCATCCTGTTGGTCGAG GACGAGGACGCCGTGCGCCGCTTCGCCGCCATGGTCCTGGAGGATGGCGGCTACGCCGTGCGGGCGGCGACCAATGGGCG CGAGGCCCTCGACATCTGGGAGGCCGAGGGGGGGCGGTTCGATTTGCTGATCAGCGATCTGGTAATGCCCGAGCTGGGCG GTCTCGCCCTTTATGACCGCCTGCGCGCCCACACCCCTTTGCTGCCGGCCGTGCTGATGTCAGGCTATTCCGACGAAATC CCCTCGGAAGACGCGCGCGAGGGCGAGGGCGCCCGCCGGGTGCTTGCCAAACCGGTCACCCCGGATGCGCTGATCGCCGC CGTCGAGGAGTTGCTGACGCCATGA
Upstream 100 bases:
>100_bases CAGGGCTCCCCTCGACCTTGTTCTCCTTCCCCAACACGGCGTATCCTTGATCCTTGGATCCAACCGCCGGGGAAGGCCTG AAAAGACGGGGCCGAGGGAG
Downstream 100 bases:
>100_bases CCCCGCCCCTTTCCGCCTCGACCGATGGAGATCCCGCCACTCCCCCCACCGGCGCCGAGGACGGCCCTGGCGGCGCGCTC TGCGTCGATCTGCGCGACAT
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MPTVDPERLKGDTLDLASIGRDFVIGLSLMVVVMLALAIPTILDRPLPDAVVLAILIPGLALVLLLIRRQRTLFKAIDRS GRRLADSEARIRDFAQSSSDWFWETGPTLAYTYASPRLLDLSGNDPAKIMGQRLSDLCPDPRSDAAERIATRRPFRDLAL TVDLGDGYRRHFRLAGRPVLDDRGVFAGYRGAGVDVTGEIAASARSEALRDLMFDAVDSISEGFVLFDPEGRLVVVNDSY RYAYPQLADHLVPGITFEELLKVAARGRDLGAEKDLRGWIDERLHRHREGGTNDCKLSDGRWYRIGEHETRGGGLVKVLM DITEMKTGADRLAQQTALLRTFVDETPVAVAMVDATLRYLRVSRRWRTEFGLEDRDIIGQRHDVVMPSLPDDWLNDYEQA LSGVAIEREEVSIDLGGRTLWLRRREYPWFLEDGTVGGLMMTAENITERKQAELALLQSQKMEAVGQLAGGIAHEFNNML TSIGGFARMAQRTPERLERVTMCLAEVVRSADRAAGLTSQLLNFSRRTTEEETLRIPLGALLDELRTFLKPVLGERIALD LRCAVESLFVLANRDRLHQALVNLCINARDAMAEGGTVIIETGHGVPPERLRCRHPHLGAGQHAVLRVIDSGCGIPEEDL PRVFEPFFTTKAQGKGTGLGLPMVYAMAEQANGAVELDSIVGRGTTVTLYLPLADGAAAAPTIEGPPPLPRGGARILLVE DEDAVRRFAAMVLEDGGYAVRAATNGREALDIWEAEGGRFDLLISDLVMPELGGLALYDRLRAHTPLLPAVLMSGYSDEI PSEDAREGEGARRVLAKPVTPDALIAAVEELLTP
Sequences:
>Translated_834_residues MPTVDPERLKGDTLDLASIGRDFVIGLSLMVVVMLALAIPTILDRPLPDAVVLAILIPGLALVLLLIRRQRTLFKAIDRS GRRLADSEARIRDFAQSSSDWFWETGPTLAYTYASPRLLDLSGNDPAKIMGQRLSDLCPDPRSDAAERIATRRPFRDLAL TVDLGDGYRRHFRLAGRPVLDDRGVFAGYRGAGVDVTGEIAASARSEALRDLMFDAVDSISEGFVLFDPEGRLVVVNDSY RYAYPQLADHLVPGITFEELLKVAARGRDLGAEKDLRGWIDERLHRHREGGTNDCKLSDGRWYRIGEHETRGGGLVKVLM DITEMKTGADRLAQQTALLRTFVDETPVAVAMVDATLRYLRVSRRWRTEFGLEDRDIIGQRHDVVMPSLPDDWLNDYEQA LSGVAIEREEVSIDLGGRTLWLRRREYPWFLEDGTVGGLMMTAENITERKQAELALLQSQKMEAVGQLAGGIAHEFNNML TSIGGFARMAQRTPERLERVTMCLAEVVRSADRAAGLTSQLLNFSRRTTEEETLRIPLGALLDELRTFLKPVLGERIALD LRCAVESLFVLANRDRLHQALVNLCINARDAMAEGGTVIIETGHGVPPERLRCRHPHLGAGQHAVLRVIDSGCGIPEEDL PRVFEPFFTTKAQGKGTGLGLPMVYAMAEQANGAVELDSIVGRGTTVTLYLPLADGAAAAPTIEGPPPLPRGGARILLVE DEDAVRRFAAMVLEDGGYAVRAATNGREALDIWEAEGGRFDLLISDLVMPELGGLALYDRLRAHTPLLPAVLMSGYSDEI PSEDAREGEGARRVLAKPVTPDALIAAVEELLTP >Mature_833_residues PTVDPERLKGDTLDLASIGRDFVIGLSLMVVVMLALAIPTILDRPLPDAVVLAILIPGLALVLLLIRRQRTLFKAIDRSG RRLADSEARIRDFAQSSSDWFWETGPTLAYTYASPRLLDLSGNDPAKIMGQRLSDLCPDPRSDAAERIATRRPFRDLALT VDLGDGYRRHFRLAGRPVLDDRGVFAGYRGAGVDVTGEIAASARSEALRDLMFDAVDSISEGFVLFDPEGRLVVVNDSYR YAYPQLADHLVPGITFEELLKVAARGRDLGAEKDLRGWIDERLHRHREGGTNDCKLSDGRWYRIGEHETRGGGLVKVLMD ITEMKTGADRLAQQTALLRTFVDETPVAVAMVDATLRYLRVSRRWRTEFGLEDRDIIGQRHDVVMPSLPDDWLNDYEQAL SGVAIEREEVSIDLGGRTLWLRRREYPWFLEDGTVGGLMMTAENITERKQAELALLQSQKMEAVGQLAGGIAHEFNNMLT SIGGFARMAQRTPERLERVTMCLAEVVRSADRAAGLTSQLLNFSRRTTEEETLRIPLGALLDELRTFLKPVLGERIALDL RCAVESLFVLANRDRLHQALVNLCINARDAMAEGGTVIIETGHGVPPERLRCRHPHLGAGQHAVLRVIDSGCGIPEEDLP RVFEPFFTTKAQGKGTGLGLPMVYAMAEQANGAVELDSIVGRGTTVTLYLPLADGAAAAPTIEGPPPLPRGGARILLVED EDAVRRFAAMVLEDGGYAVRAATNGREALDIWEAEGGRFDLLISDLVMPELGGLALYDRLRAHTPLLPAVLMSGYSDEIP SEDAREGEGARRVLAKPVTPDALIAAVEELLTP
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=34.0248962655602, Blast_Score=107, Evalue=5e-24, Organism=Escherichia coli, GI1788549, Length=326, Percent_Identity=29.4478527607362, Blast_Score=106, Evalue=7e-24, Organism=Escherichia coli, GI48994928, Length=530, Percent_Identity=24.3396226415094, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788713, Length=387, Percent_Identity=26.6149870801034, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI87081816, Length=305, Percent_Identity=27.5409836065574, Blast_Score=83, Evalue=9e-17, Organism=Escherichia coli, GI1789149, Length=410, Percent_Identity=23.4146341463415, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI145693157, Length=307, Percent_Identity=26.7100977198697, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91715; Mature: 91584
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVDPERLKGDTLDLASIGRDFVIGLSLMVVVMLALAIPTILDRPLPDAVVLAILIPGL CCCCCHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALVLLLIRRQRTLFKAIDRSGRRLADSEARIRDFAQSSSDWFWETGPTLAYTYASPRLLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEE LSGNDPAKIMGQRLSDLCPDPRSDAAERIATRRPFRDLALTVDLGDGYRRHFRLAGRPVL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCC DDRGVFAGYRGAGVDVTGEIAASARSEALRDLMFDAVDSISEGFVLFDPEGRLVVVNDSY CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCC RYAYPQLADHLVPGITFEELLKVAARGRDLGAEKDLRGWIDERLHRHREGGTNDCKLSDG CCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCC RWYRIGEHETRGGGLVKVLMDITEMKTGADRLAQQTALLRTFVDETPVAVAMVDATLRYL CEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RVSRRWRTEFGLEDRDIIGQRHDVVMPSLPDDWLNDYEQALSGVAIEREEVSIDLGGRTL HHHHHHHHHCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHCCEEECCEEEEEECCEEE WLRRREYPWFLEDGTVGGLMMTAENITERKQAELALLQSQKMEAVGQLAGGIAHEFNNML EEEECCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIGGFARMAQRTPERLERVTMCLAEVVRSADRAAGLTSQLLNFSRRTTEEETLRIPLGA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEECCHHH LLDELRTFLKPVLGERIALDLRCAVESLFVLANRDRLHQALVNLCINARDAMAEGGTVII HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCCEEEE ETGHGVPPERLRCRHPHLGAGQHAVLRVIDSGCGIPEEDLPRVFEPFFTTKAQGKGTGLG ECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPMVYAMAEQANGAVELDSIVGRGTTVTLYLPLADGAAAAPTIEGPPPLPRGGARILLVE HHHHHHHHHHCCCCEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC DEDAVRRFAAMVLEDGGYAVRAATNGREALDIWEAEGGRFDLLISDLVMPELGGLALYDR CHHHHHHHHHHHHCCCCEEEEEECCCCHHHEEEECCCCEEEEHHHHHHHHCCCCHHHHHH LRAHTPLLPAVLMSGYSDEIPSEDAREGEGARRVLAKPVTPDALIAAVEELLTP HHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PTVDPERLKGDTLDLASIGRDFVIGLSLMVVVMLALAIPTILDRPLPDAVVLAILIPGL CCCCHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALVLLLIRRQRTLFKAIDRSGRRLADSEARIRDFAQSSSDWFWETGPTLAYTYASPRLLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEECCCEEEE LSGNDPAKIMGQRLSDLCPDPRSDAAERIATRRPFRDLALTVDLGDGYRRHFRLAGRPVL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCC DDRGVFAGYRGAGVDVTGEIAASARSEALRDLMFDAVDSISEGFVLFDPEGRLVVVNDSY CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCC RYAYPQLADHLVPGITFEELLKVAARGRDLGAEKDLRGWIDERLHRHREGGTNDCKLSDG CCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCC RWYRIGEHETRGGGLVKVLMDITEMKTGADRLAQQTALLRTFVDETPVAVAMVDATLRYL CEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RVSRRWRTEFGLEDRDIIGQRHDVVMPSLPDDWLNDYEQALSGVAIEREEVSIDLGGRTL HHHHHHHHHCCCCCHHHCCCCCCEECCCCCHHHHHHHHHHHHCCEEECCEEEEEECCEEE WLRRREYPWFLEDGTVGGLMMTAENITERKQAELALLQSQKMEAVGQLAGGIAHEFNNML EEEECCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIGGFARMAQRTPERLERVTMCLAEVVRSADRAAGLTSQLLNFSRRTTEEETLRIPLGA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHEECCHHH LLDELRTFLKPVLGERIALDLRCAVESLFVLANRDRLHQALVNLCINARDAMAEGGTVII HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHCCCCEEEE ETGHGVPPERLRCRHPHLGAGQHAVLRVIDSGCGIPEEDLPRVFEPFFTTKAQGKGTGLG ECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LPMVYAMAEQANGAVELDSIVGRGTTVTLYLPLADGAAAAPTIEGPPPLPRGGARILLVE HHHHHHHHHHCCCCEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEC DEDAVRRFAAMVLEDGGYAVRAATNGREALDIWEAEGGRFDLLISDLVMPELGGLALYDR CHHHHHHHHHHHHCCCCEEEEEECCCCHHHEEEECCCCEEEEHHHHHHHHCCCCHHHHHH LRAHTPLLPAVLMSGYSDEIPSEDAREGEGARRVLAKPVTPDALIAAVEELLTP HHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA