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The map label for this gene is yciA [H]

Identifier: 83594041

GI number: 83594041

Start: 3131399

End: 3131851

Strand: Reverse

Name: yciA [H]

Synonym: Rru_A2709

Alternate gene names: 83594041

Gene position: 3131851-3131399 (Counterclockwise)

Preceding gene: 83594043

Following gene: 83594040

Centisome position: 71.95

GC content: 67.33

Gene sequence:

>453_bases
ATGAGTTGTACCGATGACGCCACCACTGGCGCTTGCCAAGTCGACCCCGGGGTGGAGGCTGGCGACGAACCGCGCGGCAC
GGTGTCGATCCGCACCATCGCCATGCCCGCCGATACCAACCCTTCGGGCGATATTTTCGGCGGCTGGCTGATGGCGCAGA
TGGATCTGGCCGGGGGAACCCACGCCCGCAAGGCGGCCGGCGGCCGGGTGGTGACGGTGGCGGTGAACGGCTTCTCGTTC
CATCTGCCGGTGAAAGTCGGCGACGAGGTGACCTGCTATACCGAGATCATCAAGCGCGGCCGCACCAGTTTGACCCTGGA
TGTGCAGGCCTGGGTCTGCCGGCAGGACGGCGGCGCCAAGATCAAGGTGACCGAAGGCGTCTTCGTTTTCGTCGCCCTGG
ATGCCGAGGGGCGGGCCCGCCCCCTGCCGCCCGTCGTTTCCTCTCCCCGCTAA

Upstream 100 bases:

>100_bases
CCAACGGCAAGGGCCTCCCGTTCGATGCCCCGGTGATAAAGCGTTCCGGCGCCGGTCATCCGACCCCGGCTTTTTTCGAT
TTTTCAGGAGTTCGCCGTTC

Downstream 100 bases:

>100_bases
CCTCCAGGGCCGCCCCCTCGGGCGCGGTAGCCGGTGGCGCACCCCGGAAATCCATGGGTTTCCGGGGAGTCGGGCCCGGG
GAGGCGGGCTGCGGAAGGCG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSCTDDATTGACQVDPGVEAGDEPRGTVSIRTIAMPADTNPSGDIFGGWLMAQMDLAGGTHARKAAGGRVVTVAVNGFSF
HLPVKVGDEVTCYTEIIKRGRTSLTLDVQAWVCRQDGGAKIKVTEGVFVFVALDAEGRARPLPPVVSSPR

Sequences:

>Translated_150_residues
MSCTDDATTGACQVDPGVEAGDEPRGTVSIRTIAMPADTNPSGDIFGGWLMAQMDLAGGTHARKAAGGRVVTVAVNGFSF
HLPVKVGDEVTCYTEIIKRGRTSLTLDVQAWVCRQDGGAKIKVTEGVFVFVALDAEGRARPLPPVVSSPR
>Mature_149_residues
SCTDDATTGACQVDPGVEAGDEPRGTVSIRTIAMPADTNPSGDIFGGWLMAQMDLAGGTHARKAAGGRVVTVAVNGFSFH
LPVKVGDEVTCYTEIIKRGRTSLTLDVQAWVCRQDGGAKIKVTEGVFVFVALDAEGRARPLPPVVSSPR

Specific function: Catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA [H]

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=123, Percent_Identity=49.5934959349593, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15703; Mature: 15572

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCTDDATTGACQVDPGVEAGDEPRGTVSIRTIAMPADTNPSGDIFGGWLMAQMDLAGGT
CCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCC
HARKAAGGRVVTVAVNGFSFHLPVKVGDEVTCYTEIIKRGRTSLTLDVQAWVCRQDGGAK
CCHHCCCCEEEEEEECCEEEEEEEEECCCEEHHHHHHHCCCCEEEEEEEEEEEECCCCCE
IKVTEGVFVFVALDAEGRARPLPPVVSSPR
EEEECCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SCTDDATTGACQVDPGVEAGDEPRGTVSIRTIAMPADTNPSGDIFGGWLMAQMDLAGGT
CCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCC
HARKAAGGRVVTVAVNGFSFHLPVKVGDEVTCYTEIIKRGRTSLTLDVQAWVCRQDGGAK
CCHHCCCCEEEEEEECCEEEEEEEEECCCEEHHHHHHHCCCCEEEEEEEEEEEECCCCCE
IKVTEGVFVFVALDAEGRARPLPPVVSSPR
EEEECCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]