| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is cbbZ [H]
Identifier: 83593990
GI number: 83593990
Start: 3087205
End: 3087915
Strand: Reverse
Name: cbbZ [H]
Synonym: Rru_A2658
Alternate gene names: 83593990
Gene position: 3087915-3087205 (Counterclockwise)
Preceding gene: 83593991
Following gene: 83593989
Centisome position: 70.94
GC content: 67.79
Gene sequence:
>711_bases ATGACCGCGATTCTTTCCGCGCCGCCGCTGCGGCTGGCGATTTTCGATGTCGACGGGACGCTGGCCGATAGTCAGCACAA TATCGTCGGCGCCATGACCGACGCCTTCCGCGCCCATGGGCTGGCCGATCCCGATCCGGCGGCGGTGCGCGCCATCATCG GTTTGTCGCTGGTCGAAGCGGTGGCCCGGGTTCTGCCCGAGGCCCCGCCCGATCAGGTCGCCGTCGTGGCCCAATCCTAT AAGCAGGCTTTCGTCACCCGGCGCATGGGACCGGCCTATACCGAGCAGCTTTTCCCCGGGGCGGCCGAGGCCGTGCGCGA TTTGGCGGCGCGCGGCGTGGTGCTGGCTTTGGCGACGGGCAAGTCGCGTCGCGGCGTCGATGTGTTTCTAGAACGCCATG GCCTGGAAGGGCTGTTCGACGCCGTGCGCACCGCCGATGACGGGCCGGGCAAGCCTGATCCCTGGATGCTGAACGATATT CTTGCGACGCTGGGCTGTGATGCGGGGTCGACCGCGATGGTCGGCGATACCACATATGATGTGGAAATGGCGGTTCGGGC CGGTATCCACGCGGTGGGCGTGGCCTGGGGCTACCATGCGCAAGCCGATCTCCGGGCGGCGGGGGCGACCCTGATCGTTC AGGAGTTCGGTCAGGTCGCGGCGGCGCTCGACACCTGTTGGGAAGGAGCGACCCTGCCCGCGGCCTCCTGA
Upstream 100 bases:
>100_bases CGCGCCGCCGCCGCCGCATTTCGTCGAGTCGCTGAAGACCCTGGGCTTCGCCCTGTCGGACGCCCCCAATCCGTTTGAAG GCTGGGATGTGGACTAAACA
Downstream 100 bases:
>100_bases ACAAGGAGTATCCATGGTGAGGGGTGGAACAATCCTGAAGGTCGTGTTCGGCTTGGCCGTCGTGCTTGTCGTGGCGGTGG TGGTGCTGGTCGCGACCTTC
Product: haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTAILSAPPLRLAIFDVDGTLADSQHNIVGAMTDAFRAHGLADPDPAAVRAIIGLSLVEAVARVLPEAPPDQVAVVAQSY KQAFVTRRMGPAYTEQLFPGAAEAVRDLAARGVVLALATGKSRRGVDVFLERHGLEGLFDAVRTADDGPGKPDPWMLNDI LATLGCDAGSTAMVGDTTYDVEMAVRAGIHAVGVAWGYHAQADLRAAGATLIVQEFGQVAAALDTCWEGATLPAAS
Sequences:
>Translated_236_residues MTAILSAPPLRLAIFDVDGTLADSQHNIVGAMTDAFRAHGLADPDPAAVRAIIGLSLVEAVARVLPEAPPDQVAVVAQSY KQAFVTRRMGPAYTEQLFPGAAEAVRDLAARGVVLALATGKSRRGVDVFLERHGLEGLFDAVRTADDGPGKPDPWMLNDI LATLGCDAGSTAMVGDTTYDVEMAVRAGIHAVGVAWGYHAQADLRAAGATLIVQEFGQVAAALDTCWEGATLPAAS >Mature_235_residues TAILSAPPLRLAIFDVDGTLADSQHNIVGAMTDAFRAHGLADPDPAAVRAIIGLSLVEAVARVLPEAPPDQVAVVAQSYK QAFVTRRMGPAYTEQLFPGAAEAVRDLAARGVVLALATGKSRRGVDVFLERHGLEGLFDAVRTADDGPGKPDPWMLNDIL ATLGCDAGSTAMVGDTTYDVEMAVRAGIHAVGVAWGYHAQADLRAAGATLIVQEFGQVAAALDTCWEGATLPAAS
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 24528; Mature: 24397
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAILSAPPLRLAIFDVDGTLADSQHNIVGAMTDAFRAHGLADPDPAAVRAIIGLSLVEA CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VARVLPEAPPDQVAVVAQSYKQAFVTRRMGPAYTEQLFPGAAEAVRDLAARGVVLALATG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCEEEEEECC KSRRGVDVFLERHGLEGLFDAVRTADDGPGKPDPWMLNDILATLGCDAGSTAMVGDTTYD CCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCHH VEMAVRAGIHAVGVAWGYHAQADLRAAGATLIVQEFGQVAAALDTCWEGATLPAAS HHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TAILSAPPLRLAIFDVDGTLADSQHNIVGAMTDAFRAHGLADPDPAAVRAIIGLSLVEA CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VARVLPEAPPDQVAVVAQSYKQAFVTRRMGPAYTEQLFPGAAEAVRDLAARGVVLALATG HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCEEEEEECC KSRRGVDVFLERHGLEGLFDAVRTADDGPGKPDPWMLNDILATLGCDAGSTAMVGDTTYD CCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCHH VEMAVRAGIHAVGVAWGYHAQADLRAAGATLIVQEFGQVAAALDTCWEGATLPAAS HHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8654968 [H]