| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593985
Identifier: 83593985
GI number: 83593985
Start: 3082336
End: 3082986
Strand: Reverse
Name: 83593985
Synonym: Rru_A2653
Alternate gene names: NA
Gene position: 3082986-3082336 (Counterclockwise)
Preceding gene: 83593986
Following gene: 83593984
Centisome position: 70.83
GC content: 65.44
Gene sequence:
>651_bases ATGGCGCTCGATCCCGGCGGTCCCGGTCTGGATGATCTGATCGCCTATGCCCACGAGACCCTGGATTATCAGGCCCTGGA GCGCATCGTCGGCTTCTATGGGCCGGCCTATCCCGGCGCCGCCTATGGCGATGCCGATCGCTGGTTTCGTGCGCGTTGGC GGATCATCACCCTGCTTGGCCTGGATCACGCGCCGCCGCGGGCGATCTTGGATCTTGGCACCTGGGGTGGCCATTTCCCG CAGCTCGCCCGCTGGCTCGGCCATTCCTGTCAGGCGATCAATCCGCCGGGCAATCCCCTGCTCGACGAGTTGTGCCGATG GATCGGCATGCGTCCGGTGTCCCATCGCCTGCGCGAAAACAAGGTGCTGCCCGAGTTTCCCTGGTATTTCGATCTGGTCG TGGCCCTTGATATCACCTTCAACCGCAAACCCGACGGCGGCGTGTTCACCCTGCGCGAATGGCGGTTCCTTCTCGATGAC CTGAAGCTGAACCATCTGGTGCCGGGGGGGCGTCTGCTTCTGGGCTTTCCCGGCTCGGGCGGGGAAGCCGGCCAGGGACT CGACGATCCGGCCTTGCTCGAGCTGTTCGCCGCCCGGGGCGGGCACCGGCTTGCCGACGAGAACGTCGTGCTGTTCGATC CCTTGCGCTGA
Upstream 100 bases:
>100_bases CTTTCGTGGGAAGGTCGGGTCTTATCGGGTCTTTCGTCCCCGAGGGAGGGGCCCATCGCGTCCTTTCCATCCTCATTCTT CGTGAAGCAAGGAAATTCCC
Downstream 100 bases:
>100_bases CAGGGCGGGGTCCTTGCGCCGACAAGGCGGCCCCCTGGCCCCAGCCGGGCGGCAAAGGGCTTGACCTTGGCGGCGGCGCA CGCAAATAACAAGGAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MALDPGGPGLDDLIAYAHETLDYQALERIVGFYGPAYPGAAYGDADRWFRARWRIITLLGLDHAPPRAILDLGTWGGHFP QLARWLGHSCQAINPPGNPLLDELCRWIGMRPVSHRLRENKVLPEFPWYFDLVVALDITFNRKPDGGVFTLREWRFLLDD LKLNHLVPGGRLLLGFPGSGGEAGQGLDDPALLELFAARGGHRLADENVVLFDPLR
Sequences:
>Translated_216_residues MALDPGGPGLDDLIAYAHETLDYQALERIVGFYGPAYPGAAYGDADRWFRARWRIITLLGLDHAPPRAILDLGTWGGHFP QLARWLGHSCQAINPPGNPLLDELCRWIGMRPVSHRLRENKVLPEFPWYFDLVVALDITFNRKPDGGVFTLREWRFLLDD LKLNHLVPGGRLLLGFPGSGGEAGQGLDDPALLELFAARGGHRLADENVVLFDPLR >Mature_215_residues ALDPGGPGLDDLIAYAHETLDYQALERIVGFYGPAYPGAAYGDADRWFRARWRIITLLGLDHAPPRAILDLGTWGGHFPQ LARWLGHSCQAINPPGNPLLDELCRWIGMRPVSHRLRENKVLPEFPWYFDLVVALDITFNRKPDGGVFTLREWRFLLDDL KLNHLVPGGRLLLGFPGSGGEAGQGLDDPALLELFAARGGHRLADENVVLFDPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24082; Mature: 23951
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDPGGPGLDDLIAYAHETLDYQALERIVGFYGPAYPGAAYGDADRWFRARWRIITLLG CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEEC LDHAPPRAILDLGTWGGHFPQLARWLGHSCQAINPPGNPLLDELCRWIGMRPVSHRLREN CCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHC KVLPEFPWYFDLVVALDITFNRKPDGGVFTLREWRFLLDDLKLNHLVPGGRLLLGFPGSG CCCCCCCHHHEEEEHEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCC GEAGQGLDDPALLELFAARGGHRLADENVVLFDPLR CCCCCCCCCHHHHHHHHHCCCCEECCCCEEEEECCC >Mature Secondary Structure ALDPGGPGLDDLIAYAHETLDYQALERIVGFYGPAYPGAAYGDADRWFRARWRIITLLG CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEEC LDHAPPRAILDLGTWGGHFPQLARWLGHSCQAINPPGNPLLDELCRWIGMRPVSHRLREN CCCCCCHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHC KVLPEFPWYFDLVVALDITFNRKPDGGVFTLREWRFLLDDLKLNHLVPGGRLLLGFPGSG CCCCCCCHHHEEEEHEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCC GEAGQGLDDPALLELFAARGGHRLADENVVLFDPLR CCCCCCCCCHHHHHHHHHCCCCEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA