| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593966
Identifier: 83593966
GI number: 83593966
Start: 3062291
End: 3063238
Strand: Reverse
Name: 83593966
Synonym: Rru_A2634
Alternate gene names: NA
Gene position: 3063238-3062291 (Counterclockwise)
Preceding gene: 83593971
Following gene: 83593965
Centisome position: 70.37
GC content: 65.72
Gene sequence:
>948_bases ATGGGTCATGCTTCGAGGCCCAAAGTTACCCGCGCCGTCATCCCCAGGACAGGCGCGGCTCCCGGGCTTGGGCTATCGTG CGTCGTCGGCGGGCGGCGATCGGCCGTCCCCGCTGTCGCCCCTTTTGTTCCATCTGTGTCAAAGAAGCCGTCCATGGAAA CCCTCTTAGGGTCCGAATCCCCCCCCAAATCATCGTTCCTTTCGGCGGTCCGGGGTGTGGTGCGCGGCCTGGATCCACGC GGGCGCCTTCTGGGCGCGCTGTTCTGCGCCTTGGTCATCGTCGGCCTGGAAAGCCCGGTCGCCCTGTCTTTGGCGCTGAT CCTGGCTCTGTGTCTGTTGATCGGCGCCGGCCTGCCGATCGGGCGCACCCTGAAACGCATGGCGATGATGGACGGCTTCA TCGTCGCCATGCTGGTGCTGATCCCCTTCACCATCCCCGGAGACGCGGCCTTCAGCCTGTTTGGGTGGCCGGCGAGTTGG CAGGGGCTAGACCGCGCCCTGGTGATCGGTCTGCGCGCCAATGGGGTGATCTTGTGCCTGATGGCCCTGGTCGGATCGAT GGAGCCGACGACGCTGGGCCACGGGCTCGCCCGCCTGGGCCTGCCCGATACCCTGGTCCATCTTCTGCTGCTCAGCGTGC GCTATATCGATGTCATCAACGCCGAATACGGCCGCCTGCGCCGGGCGATGAAAACCCGCGGGTTCCGCCTAGCCAATAGC CGCCATACCTACCGCACGCTGGGTTATCTGATCGGCATGTTGCTGGTGCGCGCCCTTGATCGTTCCGAGCGCATCGCCCG GGCGATGACATGCCGGGGCTTCACCGGCCGCCTGCCTTTGCTCGATACCCTGGCCTGGAGCTGGCGCGACGGCCTTTTCG CCCTGTTGTTGATCGCCGCCCTGGGCGGGATCGTTGTCGTGGAGATTGGCCATGGCCGTCTTGCTTGA
Upstream 100 bases:
>100_bases AGTTTTGGGACCCTGCTCGGGACGCGAGAGCGGCGCAAGACAAAATGGCGGAGGAAAAATGATCGTTTCGCGACATGACG CCCTTTGTCGGTAGGATAGC
Downstream 100 bases:
>100_bases GGTGTCGGATCTGCGTTTCGCCTATCCCGGCCGCCCGGCCGTGCTCGATGGCGCGACGATGGGCCTGGAGGCGGGGGAGC GTCTGGCGATCACCGGTCCC
Product: cobalt transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGHASRPKVTRAVIPRTGAAPGLGLSCVVGGRRSAVPAVAPFVPSVSKKPSMETLLGSESPPKSSFLSAVRGVVRGLDPR GRLLGALFCALVIVGLESPVALSLALILALCLLIGAGLPIGRTLKRMAMMDGFIVAMLVLIPFTIPGDAAFSLFGWPASW QGLDRALVIGLRANGVILCLMALVGSMEPTTLGHGLARLGLPDTLVHLLLLSVRYIDVINAEYGRLRRAMKTRGFRLANS RHTYRTLGYLIGMLLVRALDRSERIARAMTCRGFTGRLPLLDTLAWSWRDGLFALLLIAALGGIVVVEIGHGRLA
Sequences:
>Translated_315_residues MGHASRPKVTRAVIPRTGAAPGLGLSCVVGGRRSAVPAVAPFVPSVSKKPSMETLLGSESPPKSSFLSAVRGVVRGLDPR GRLLGALFCALVIVGLESPVALSLALILALCLLIGAGLPIGRTLKRMAMMDGFIVAMLVLIPFTIPGDAAFSLFGWPASW QGLDRALVIGLRANGVILCLMALVGSMEPTTLGHGLARLGLPDTLVHLLLLSVRYIDVINAEYGRLRRAMKTRGFRLANS RHTYRTLGYLIGMLLVRALDRSERIARAMTCRGFTGRLPLLDTLAWSWRDGLFALLLIAALGGIVVVEIGHGRLA >Mature_314_residues GHASRPKVTRAVIPRTGAAPGLGLSCVVGGRRSAVPAVAPFVPSVSKKPSMETLLGSESPPKSSFLSAVRGVVRGLDPRG RLLGALFCALVIVGLESPVALSLALILALCLLIGAGLPIGRTLKRMAMMDGFIVAMLVLIPFTIPGDAAFSLFGWPASWQ GLDRALVIGLRANGVILCLMALVGSMEPTTLGHGLARLGLPDTLVHLLLLSVRYIDVINAEYGRLRRAMKTRGFRLANSR HTYRTLGYLIGMLLVRALDRSERIARAMTCRGFTGRLPLLDTLAWSWRDGLFALLLIAALGGIVVVEIGHGRLA
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003339 - InterPro: IPR012809 [H]
Pfam domain/function: PF02361 CbiQ [H]
EC number: NA
Molecular weight: Translated: 33498; Mature: 33367
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHASRPKVTRAVIPRTGAAPGLGLSCVVGGRRSAVPAVAPFVPSVSKKPSMETLLGSES CCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHCCCC PPKSSFLSAVRGVVRGLDPRGRLLGALFCALVIVGLESPVALSLALILALCLLIGAGLPI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH GRTLKRMAMMDGFIVAMLVLIPFTIPGDAAFSLFGWPASWQGLDRALVIGLRANGVILCL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH MALVGSMEPTTLGHGLARLGLPDTLVHLLLLSVRYIDVINAEYGRLRRAMKTRGFRLANS HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RHTYRTLGYLIGMLLVRALDRSERIARAMTCRGFTGRLPLLDTLAWSWRDGLFALLLIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGGIVVVEIGHGRLA HCCEEEEEECCCCCC >Mature Secondary Structure GHASRPKVTRAVIPRTGAAPGLGLSCVVGGRRSAVPAVAPFVPSVSKKPSMETLLGSES CCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHCCCC PPKSSFLSAVRGVVRGLDPRGRLLGALFCALVIVGLESPVALSLALILALCLLIGAGLPI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH GRTLKRMAMMDGFIVAMLVLIPFTIPGDAAFSLFGWPASWQGLDRALVIGLRANGVILCL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCHHHHHH MALVGSMEPTTLGHGLARLGLPDTLVHLLLLSVRYIDVINAEYGRLRRAMKTRGFRLANS HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RHTYRTLGYLIGMLLVRALDRSERIARAMTCRGFTGRLPLLDTLAWSWRDGLFALLLIAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGGIVVVEIGHGRLA HCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]