| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593933
Identifier: 83593933
GI number: 83593933
Start: 3023081
End: 3024088
Strand: Reverse
Name: 83593933
Synonym: Rru_A2601
Alternate gene names: NA
Gene position: 3024088-3023081 (Counterclockwise)
Preceding gene: 83593936
Following gene: 83593928
Centisome position: 69.47
GC content: 71.43
Gene sequence:
>1008_bases GTGGTGGACAACGGGGGCAGGGGCCGGGACGGGGGCGAAAGCGGCGGGGTGAGCGTGGATCTGACGGCGGCGATCGTCGC CGTCACCGGCGAGGATCCCCGGGTGTTGGTCGTCGCCCGTCCTGGTCGGGACGACGACTCCTTTCCATCGGGACCGCTGC GCGACAGCCACCGCACCTTGCAGGCCGGCCTGCGCGCCTGGGTGGAACGCCAGACCGGGCGGACGCTGGGCCATGTCGAA CAGCTTTACGCCTTCGGCGATCGCGACCGCGTTCTCCCCGCGTCCTCGGGTTCTGGCGAGGGCGGGGGCGGCCGGGTGTT GTCGCTGGCCTATCTGGCCTTGGTGCGCGAGGCCGGCGACGGGCCGGCCGAATGGCCGGGGGCGCGCTGGCGCGGCTGGT ATGACTTCCTGCCCTGGGAAGACCGCCGGGCCGCCCGCCCCACCGACCGCTCGATCCTGGCCGATCGTCTGGCGGCTTGG GCCCGGCGCGCCGCTGATCCCGCCGCCCGGCGGGCGCGGGTGGATCGGGTCGGCCTGTTGTTCGGTCTGGAGGGGCGTCC CTGGGACGAGGAGGCGGTTCTAGAACGCTATGAGGCGCTGTTCGAGGCGCGGCTGGTTCCCGAAGCCTGGCGCGGCGCCC CGGTTCCGGTTCCCGAGGCGGTCAGCGAACTGGGCGGACGGCCGATGGCGGGCGATCACCGGCGCATCCTGGCCAGCGCG CTGGGCCGGCTGCGCACGACGATCAAATACCGTCCGGTGTTGTTTGAACTGATGGCCCCCCACTTCACCTTGCTTCAGCT GCAGCGCACCGCTGAAGCGCTATCGGGGGCGCGCTTGCACAAGCAAAATTTCCGCCGGCTGGTCGAACAACAGGGGCTGG TCGAGGAAACCGGCGAGGTTTTTGCCGAAACCGGCGGCCGCCCGGCCAAATTGATGCGCTTCCGCTCGGAAATCCGCCGG GAACGCCCCTCGGTCGGCCTGCGCATGCGGGCGCGACCCGAGGATTGA
Upstream 100 bases:
>100_bases GGGAGCCCTATATTAGATGAAACTGCCCGGCAGGGGCACTTTTAAGTCGTTTGATCCGGTGTAAAGACGGTGGCGCGGCG CGATCGGCGAAGGAGGAGGT
Downstream 100 bases:
>100_bases TCCCGGCGGCGGTCGGGCGACCACCGCCGGGGTCTGGATCGGCAAGCGAACCGCCGTCATGCTCCGCTGCGGATCGCTCG GGGAGATTGGTTAATCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MVDNGGRGRDGGESGGVSVDLTAAIVAVTGEDPRVLVVARPGRDDDSFPSGPLRDSHRTLQAGLRAWVERQTGRTLGHVE QLYAFGDRDRVLPASSGSGEGGGGRVLSLAYLALVREAGDGPAEWPGARWRGWYDFLPWEDRRAARPTDRSILADRLAAW ARRAADPAARRARVDRVGLLFGLEGRPWDEEAVLERYEALFEARLVPEAWRGAPVPVPEAVSELGGRPMAGDHRRILASA LGRLRTTIKYRPVLFELMAPHFTLLQLQRTAEALSGARLHKQNFRRLVEQQGLVEETGEVFAETGGRPAKLMRFRSEIRR ERPSVGLRMRARPED
Sequences:
>Translated_335_residues MVDNGGRGRDGGESGGVSVDLTAAIVAVTGEDPRVLVVARPGRDDDSFPSGPLRDSHRTLQAGLRAWVERQTGRTLGHVE QLYAFGDRDRVLPASSGSGEGGGGRVLSLAYLALVREAGDGPAEWPGARWRGWYDFLPWEDRRAARPTDRSILADRLAAW ARRAADPAARRARVDRVGLLFGLEGRPWDEEAVLERYEALFEARLVPEAWRGAPVPVPEAVSELGGRPMAGDHRRILASA LGRLRTTIKYRPVLFELMAPHFTLLQLQRTAEALSGARLHKQNFRRLVEQQGLVEETGEVFAETGGRPAKLMRFRSEIRR ERPSVGLRMRARPED >Mature_335_residues MVDNGGRGRDGGESGGVSVDLTAAIVAVTGEDPRVLVVARPGRDDDSFPSGPLRDSHRTLQAGLRAWVERQTGRTLGHVE QLYAFGDRDRVLPASSGSGEGGGGRVLSLAYLALVREAGDGPAEWPGARWRGWYDFLPWEDRRAARPTDRSILADRLAAW ARRAADPAARRARVDRVGLLFGLEGRPWDEEAVLERYEALFEARLVPEAWRGAPVPVPEAVSELGGRPMAGDHRRILASA LGRLRTTIKYRPVLFELMAPHFTLLQLQRTAEALSGARLHKQNFRRLVEQQGLVEETGEVFAETGGRPAKLMRFRSEIRR ERPSVGLRMRARPED
Specific function: Unknown
COG id: COG4111
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37060; Mature: 37060
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDNGGRGRDGGESGGVSVDLTAAIVAVTGEDPRVLVVARPGRDDDSFPSGPLRDSHRTL CCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHH QAGLRAWVERQTGRTLGHVEQLYAFGDRDRVLPASSGSGEGGGGRVLSLAYLALVREAGD HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC GPAEWPGARWRGWYDFLPWEDRRAARPTDRSILADRLAAWARRAADPAARRARVDRVGLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEE FGLEGRPWDEEAVLERYEALFEARLVPEAWRGAPVPVPEAVSELGGRPMAGDHRRILASA EECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH LGRLRTTIKYRPVLFELMAPHFTLLQLQRTAEALSGARLHKQNFRRLVEQQGLVEETGEV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FAETGGRPAKLMRFRSEIRRERPSVGLRMRARPED HHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC >Mature Secondary Structure MVDNGGRGRDGGESGGVSVDLTAAIVAVTGEDPRVLVVARPGRDDDSFPSGPLRDSHRTL CCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHH QAGLRAWVERQTGRTLGHVEQLYAFGDRDRVLPASSGSGEGGGGRVLSLAYLALVREAGD HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC GPAEWPGARWRGWYDFLPWEDRRAARPTDRSILADRLAAWARRAADPAARRARVDRVGLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEE FGLEGRPWDEEAVLERYEALFEARLVPEAWRGAPVPVPEAVSELGGRPMAGDHRRILASA EECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH LGRLRTTIKYRPVLFELMAPHFTLLQLQRTAEALSGARLHKQNFRRLVEQQGLVEETGEV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH FAETGGRPAKLMRFRSEIRRERPSVGLRMRARPED HHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA