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The map label for this gene is flgD [C]

Identifier: 83593868

GI number: 83593868

Start: 2947080

End: 2947769

Strand: Reverse

Name: flgD [C]

Synonym: Rru_A2533

Alternate gene names: 83593868

Gene position: 2947769-2947080 (Counterclockwise)

Preceding gene: 83593876

Following gene: 161777623

Centisome position: 67.72

GC content: 55.8

Gene sequence:

>690_bases
ATGAGCACGATTACTTCCACGTCTTCAACGGAAACGAGCGGTAAGGCCACCTCGACCTCGGCAGAGTCGCTCAGCAAACT
CGACGAGAATTACAAGTTGTTTCTTACGGTGTTGACCACGCAGCTGAAAAACCAGAATCCGCTTAATCCCACAGATCCCA
ACGAGATGACCCAGCAGCTCATCTCGTATTCGCAGGTCGAGCAGCAGATTTTGGGCAATCAGTACCTGGAGAATTTGGTG
CTTTCGACCAACAACCAGACGGCCGAAACGGCCCTGGCCTTTGTTGGCAAGGAAGTGGTTTACACCAGCGATAATCGGGA
ATTTTCGGGCGAAAAAATCGACTGGAAGATGACCGTCCCCGAGAGCGCCAAGTCGGTTTCCTTCGTGGTCACCAACGCCA
AGGGCGACGTTATCTATTCTAAGACCGAAACGCCTGAAAGCGGCGCTTACACCTTCACTTGGGATGGCGCGACCACCGCC
GGCAGCAAAGCCGTTGATGGGTCCTACACCCTTACCGCCAAGGCCACTCTGGCCGACGACAAGACCAAAACCATCGATCT
GCAAAGCACCAGCACCGTCGCCGAGGTCGATTGGTCCTCGGGCGCGGCCCAGCTCAAGCTGGCCAATGGGTCGTTGATTT
CACTCTCCAACATTGTCACGGCGCGTGTCGCCGCGGCCAAAGCCGCCTAA

Upstream 100 bases:

>100_bases
CCGGCGCTCTTCCGTTTGCCTTTCGACAGGCGGTGTCCCGTCCCCCAAGGGCCAGTCCCCCAAGGGTATGTGGCCGCTCC
CCCGAAAAGGACGGATGACG

Downstream 100 bases:

>100_bases
CGGGGGAAAACCACCATGAGCAGCCTGAGCAGTTCCCTCAATGTCACCACCATGAGCAGCCTGAGCAGTTCCCTCAATGT
CGCGGTTTCCGCGATGAACG

Product: flagellar hook capping protein

Products: NA

Alternate protein names: Basal-Body Rod Protein FlgD; Flagellar Basal Body Rod Protein; Flagellar Basal-Body Rod Protein FlgD; Flagellar Basal-Body Rod Protein; Flagellar Hook Assembly Protein; Flagellar Hook Assembly Protein FlgD; FlgD Protein; Basal-Body Rod Protein; Flagellar Hook Capping Protein FlgD; Flagellar Hook Initiation Protein FlgD

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSTITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQVEQQILGNQYLENLV
LSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVPESAKSVSFVVTNAKGDVIYSKTETPESGAYTFTWDGATTA
GSKAVDGSYTLTAKATLADDKTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNIVTARVAAAKAA

Sequences:

>Translated_229_residues
MSTITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQVEQQILGNQYLENLV
LSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVPESAKSVSFVVTNAKGDVIYSKTETPESGAYTFTWDGATTA
GSKAVDGSYTLTAKATLADDKTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNIVTARVAAAKAA
>Mature_228_residues
STITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQLISYSQVEQQILGNQYLENLVL
STNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVPESAKSVSFVVTNAKGDVIYSKTETPESGAYTFTWDGATTAG
SKAVDGSYTLTAKATLADDKTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNIVTARVAAAKAA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24425; Mature: 24294

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQL
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHH
ISYSQVEQQILGNQYLENLVLSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVP
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECC
ESAKSVSFVVTNAKGDVIYSKTETPESGAYTFTWDGATTAGSKAVDGSYTLTAKATLADD
CCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
KTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNIVTARVAAAKAA
CCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STITSTSSTETSGKATSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTDPNEMTQQL
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHH
ISYSQVEQQILGNQYLENLVLSTNNQTAETALAFVGKEVVYTSDNREFSGEKIDWKMTVP
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECC
ESAKSVSFVVTNAKGDVIYSKTETPESGAYTFTWDGATTAGSKAVDGSYTLTAKATLADD
CCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
KTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNIVTARVAAAKAA
CCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA