| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ywnB [H]
Identifier: 83593857
GI number: 83593857
Start: 2937429
End: 2938040
Strand: Reverse
Name: ywnB [H]
Synonym: Rru_A2522
Alternate gene names: 83593857
Gene position: 2938040-2937429 (Counterclockwise)
Preceding gene: 83593859
Following gene: 83593854
Centisome position: 67.5
GC content: 67.32
Gene sequence:
>612_bases ATGCCTATCGCCCTAATCGGCGCCTCGGGCAATGCCGGGTCGCGCATCCTTGCCGAATTGTCGCGTCGCGGTCACCGCGT CACCGCCCTGGTCCGCCATCCCGAAGCCATTCCCGCCTTGCCCGGCGTCACCGCCCAGGCCGCCGATGTCGGCGACGGCG AAACCCTGGCCAAGCTGCTGGAAGGTCACGACGCGGTGATTTCGTCGGTGCATTTCACCGCCAGCGATGCCCCAACCCTG ATCGCGGCGGTGCGCACCTCCGGCGTCGGGCGCTATCTGGTGGTTGGCGGGGCCGGCAGTCTGGCCGTGGCGCCGGGCAA GCGGCTGATCGACGATCCGGGCTTCCCCGCCGTTTATCGGGAAGAAGCGGGCAAGGGCGCCGCCTTCCTTGATCTGCTGC GCGGCACCGAGGACCTTGATTGGACCTTCCTGTCGCCCTCGGCCGAATTCATCGCCGGCGAGCGCACCGGGGTTTTCCGC TTGGGCAGCGATGATCTGCTGGTCGACGCCAACGGCCGTAGCTGGATTTCCTTTGAGGATTACGCCATCGCCCTGGTCGA CGAGGTGGAAACGCCGCGCCACCCCAAGGCGCGGTTCACCGTCGGCTATTAA
Upstream 100 bases:
>100_bases CCCTGCGGTGACCTGCGCGGGGGAAAGTGCCTTCTTGCGGGATTTGTGAAACAGGGGCATCTGGTATCCGACAGTAACCT GCTTCATCGGAGAAATCATC
Downstream 100 bases:
>100_bases ATCAAAGACCCTGGGAGCAGGGGGCGGGCGATCCTATCCGTCGATGCCTTCGAGCATCGGTTCCGCCGCCTCCTCGCCGG CTTTTGCGCGCTTGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPIALIGASGNAGSRILAELSRRGHRVTALVRHPEAIPALPGVTAQAADVGDGETLAKLLEGHDAVISSVHFTASDAPTL IAAVRTSGVGRYLVVGGAGSLAVAPGKRLIDDPGFPAVYREEAGKGAAFLDLLRGTEDLDWTFLSPSAEFIAGERTGVFR LGSDDLLVDANGRSWISFEDYAIALVDEVETPRHPKARFTVGY
Sequences:
>Translated_203_residues MPIALIGASGNAGSRILAELSRRGHRVTALVRHPEAIPALPGVTAQAADVGDGETLAKLLEGHDAVISSVHFTASDAPTL IAAVRTSGVGRYLVVGGAGSLAVAPGKRLIDDPGFPAVYREEAGKGAAFLDLLRGTEDLDWTFLSPSAEFIAGERTGVFR LGSDDLLVDANGRSWISFEDYAIALVDEVETPRHPKARFTVGY >Mature_202_residues PIALIGASGNAGSRILAELSRRGHRVTALVRHPEAIPALPGVTAQAADVGDGETLAKLLEGHDAVISSVHFTASDAPTLI AAVRTSGVGRYLVVGGAGSLAVAPGKRLIDDPGFPAVYREEAGKGAAFLDLLRGTEDLDWTFLSPSAEFIAGERTGVFRL GSDDLLVDANGRSWISFEDYAIALVDEVETPRHPKARFTVGY
Specific function: Unknown
COG id: COG2910
COG function: function code R; Putative NADH-flavin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR008030 [H]
Pfam domain/function: PF05368 NmrA [H]
EC number: NA
Molecular weight: Translated: 21289; Mature: 21158
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIALIGASGNAGSRILAELSRRGHRVTALVRHPEAIPALPGVTAQAADVGDGETLAKLL CCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH EGHDAVISSVHFTASDAPTLIAAVRTSGVGRYLVVGGAGSLAVAPGKRLIDDPGFPAVYR CCCHHHHHEEEECCCCCCEEEEEEHHCCCCEEEEEECCCCEEECCCCHHCCCCCCCCHHH EEAGKGAAFLDLLRGTEDLDWTFLSPSAEFIAGERTGVFRLGSDDLLVDANGRSWISFED HCCCCCHHHHHHHCCCCCCCEEEECCCHHEEECCCCCEEEECCCCEEEECCCCEEEEECC YAIALVDEVETPRHPKARFTVGY EEEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure PIALIGASGNAGSRILAELSRRGHRVTALVRHPEAIPALPGVTAQAADVGDGETLAKLL CEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH EGHDAVISSVHFTASDAPTLIAAVRTSGVGRYLVVGGAGSLAVAPGKRLIDDPGFPAVYR CCCHHHHHEEEECCCCCCEEEEEEHHCCCCEEEEEECCCCEEECCCCHHCCCCCCCCHHH EEAGKGAAFLDLLRGTEDLDWTFLSPSAEFIAGERTGVFRLGSDDLLVDANGRSWISFED HCCCCCHHHHHHHCCCCCCCEEEECCCHHEEECCCCCEEEECCCCEEEECCCCEEEEECC YAIALVDEVETPRHPKARFTVGY EEEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9150240; 9384377 [H]