| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is znuC [H]
Identifier: 83593724
GI number: 83593724
Start: 2780360
End: 2781091
Strand: Reverse
Name: znuC [H]
Synonym: Rru_A2389
Alternate gene names: 83593724
Gene position: 2781091-2780360 (Counterclockwise)
Preceding gene: 83593725
Following gene: 83593723
Centisome position: 63.89
GC content: 69.26
Gene sequence:
>732_bases GTGAGCGGTCCGTCGATCGAAATCAGCGGACTGAGCTTGGCTTTGGGCGGCACCTCGATCCTGGAGGACGTGGCGCTGCG GGTGGCGCCGGGGACGATCCAGGCGGTGGTCGGTCCCAATGGCGGCGGTAAGTCGTCGCTGGTGTCGGCCCTGCTCGGGC TGATGCCCCATCGCGGGACGATCGATATCGACTGGCCGGGCGATCGCCCCGGCGTGCTGGCCTATGTTCCCCAATCCCTG GCCTTCGATCCCGGTCTGCCGATGACCGTCAGCGATGTTCTGGCGGTGATGTGCCAGCGCCGCCCGGCCTTTCTCGGCCC CGCGCGCCGCCTTGCCGGGCGCTATGACCAGGCTTTGGAGCGGGTGGGGATGGCGGGCAAGCGTCATCGGCGCTTCGGCG CGCTGTCGGGGGGCGAGCGCCAAAGGGTTCTGCTGGCCCAGGCACTGATCCCCGACCCCGATCTGGTGATCCTTGATGAG CCGATGACGGCGCTTGATGAAGCCGGAGCCGTGATCTTCGAGGATGTTCTGGCCGGGTTCCGGGCGCGCGGCGTCACGGT TTTATGGGTGGAGCACGACCTGGGGGCGGTGCGCCGGCTGGCCGATCACGCCTGCGGCTTGAACCGCGCGGTTCTGTTCA ATGGGCCGCCCTCGGCCGTTCTGGCGGCCGAGCGCCTGCTGGCGCTGTTCTCCGCCCCGTCTCAGCGCTCCCTGCGGGAG GCCCTATCGTGA
Upstream 100 bases:
>100_bases TCTCGCATATCTCGACGGGCGCCTATACCGCGAGCCTGTTCGAGGAAGAGACCGGGCGCAATCTCGATACCCTGGTCCGC GCCATGCTGGAGGCCAAGGG
Downstream 100 bases:
>100_bases GCTTCGAAGCGCTGCGCGCCGTCGTCCAGGGCTGGGCGGCGGCGGGATTGCTGCCCGCCGGGCTGACCTATGGCTTCCTG GTCAACGCCCTGATCGCCGC
Product: ABC transporter protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSGPSIEISGLSLALGGTSILEDVALRVAPGTIQAVVGPNGGGKSSLVSALLGLMPHRGTIDIDWPGDRPGVLAYVPQSL AFDPGLPMTVSDVLAVMCQRRPAFLGPARRLAGRYDQALERVGMAGKRHRRFGALSGGERQRVLLAQALIPDPDLVILDE PMTALDEAGAVIFEDVLAGFRARGVTVLWVEHDLGAVRRLADHACGLNRAVLFNGPPSAVLAAERLLALFSAPSQRSLRE ALS
Sequences:
>Translated_243_residues MSGPSIEISGLSLALGGTSILEDVALRVAPGTIQAVVGPNGGGKSSLVSALLGLMPHRGTIDIDWPGDRPGVLAYVPQSL AFDPGLPMTVSDVLAVMCQRRPAFLGPARRLAGRYDQALERVGMAGKRHRRFGALSGGERQRVLLAQALIPDPDLVILDE PMTALDEAGAVIFEDVLAGFRARGVTVLWVEHDLGAVRRLADHACGLNRAVLFNGPPSAVLAAERLLALFSAPSQRSLRE ALS >Mature_242_residues SGPSIEISGLSLALGGTSILEDVALRVAPGTIQAVVGPNGGGKSSLVSALLGLMPHRGTIDIDWPGDRPGVLAYVPQSLA FDPGLPMTVSDVLAVMCQRRPAFLGPARRLAGRYDQALERVGMAGKRHRRFGALSGGERQRVLLAQALIPDPDLVILDEP MTALDEAGAVIFEDVLAGFRARGVTVLWVEHDLGAVRRLADHACGLNRAVLFNGPPSAVLAAERLLALFSAPSQRSLREA LS
Specific function: Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system [H]
COG id: COG1121
COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI157502203, Length=190, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI157502201, Length=190, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI171184400, Length=195, Percent_Identity=29.2307692307692, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1788165, Length=229, Percent_Identity=35.3711790393013, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1790739, Length=248, Percent_Identity=32.258064516129, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=27.0491803278689, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1786563, Length=196, Percent_Identity=34.6938775510204, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786345, Length=251, Percent_Identity=30.6772908366534, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081791, Length=227, Percent_Identity=32.5991189427313, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=30.8035714285714, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=27.4678111587983, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081834, Length=194, Percent_Identity=32.9896907216495, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789032, Length=230, Percent_Identity=33.4782608695652, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790544, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786319, Length=187, Percent_Identity=30.4812834224599, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=170, Percent_Identity=34.1176470588235, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788053, Length=196, Percent_Identity=33.6734693877551, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=25.8474576271186, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1787089, Length=256, Percent_Identity=25.78125, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787759, Length=231, Percent_Identity=29.4372294372294, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786975, Length=202, Percent_Identity=32.1782178217822, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994943, Length=189, Percent_Identity=30.6878306878307, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1790467, Length=214, Percent_Identity=30.3738317757009, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=230, Percent_Identity=27.3913043478261, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI145693107, Length=195, Percent_Identity=31.7948717948718, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787370, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082267, Length=229, Percent_Identity=31.4410480349345, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786698, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789873, Length=194, Percent_Identity=32.4742268041237, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789962, Length=227, Percent_Identity=28.6343612334802, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1787164, Length=203, Percent_Identity=31.5270935960591, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787758, Length=227, Percent_Identity=27.3127753303965, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789586, Length=228, Percent_Identity=29.8245614035088, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1787500, Length=194, Percent_Identity=27.319587628866, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI87081782, Length=200, Percent_Identity=27.5, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787182, Length=194, Percent_Identity=31.4432989690722, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788897, Length=205, Percent_Identity=28.2926829268293, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115535101, Length=214, Percent_Identity=28.5046728971963, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574744, Length=172, Percent_Identity=30.8139534883721, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24648279, Length=176, Percent_Identity=30.6818181818182, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI161078426, Length=176, Percent_Identity=30.6818181818182, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24581191, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581189, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581193, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581195, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24662800, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017882 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 25579; Mature: 25448
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPSIEISGLSLALGGTSILEDVALRVAPGTIQAVVGPNGGGKSSLVSALLGLMPHRGT CCCCCEEEECEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCE IDIDWPGDRPGVLAYVPQSLAFDPGLPMTVSDVLAVMCQRRPAFLGPARRLAGRYDQALE EEECCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RVGMAGKRHRRFGALSGGERQRVLLAQALIPDPDLVILDEPMTALDEAGAVIFEDVLAGF HHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHHHHH RARGVTVLWVEHDLGAVRRLADHACGLNRAVLFNGPPSAVLAAERLLALFSAPSQRSLRE HHCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH ALS HCC >Mature Secondary Structure SGPSIEISGLSLALGGTSILEDVALRVAPGTIQAVVGPNGGGKSSLVSALLGLMPHRGT CCCCEEEECEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCE IDIDWPGDRPGVLAYVPQSLAFDPGLPMTVSDVLAVMCQRRPAFLGPARRLAGRYDQALE EEECCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RVGMAGKRHRRFGALSGGERQRVLLAQALIPDPDLVILDEPMTALDEAGAVIFEDVLAGF HHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHCCHHHHHHHHHHH RARGVTVLWVEHDLGAVRRLADHACGLNRAVLFNGPPSAVLAAERLLALFSAPSQRSLRE HHCCEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH ALS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA