| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593722
Identifier: 83593722
GI number: 83593722
Start: 2778535
End: 2779476
Strand: Reverse
Name: 83593722
Synonym: Rru_A2387
Alternate gene names: NA
Gene position: 2779476-2778535 (Counterclockwise)
Preceding gene: 83593723
Following gene: 83593721
Centisome position: 63.85
GC content: 72.82
Gene sequence:
>942_bases ATGAAGATCCTCGCCCTTTTCCTTTCCCTGATCGCTTTCACTCTGCCCTCGGCCGCCCGCGCCGAAGCGGTGATCCTGGC CGGTCATCCGTTGACGGCGGGATTGGCCGGCGCCCTGCTTGATGGTACGGCGGTGAGCCTGCGGGTGGTGGTGCCGGCCG CCCTGCCGATGGGCCGGCAGGCGGCTTTCCTGGCCGGGCGTGGGGAAAAGGCGCTGGCCGAGGCCGCCCTGGGCGCCGAG GCGGTGGTGTCGCTGCGCTCGCTGTGGCCCGAGGATCCGCTGTTTCCCATGGCGCGGCGGACCAATATCCGCCTGGTCGA GATCGACGCCGGCCGGCCGGTCGATGGCGCCTTGCCCGGGGTCGCCGCCGTGCGCGCGCCCTCGGCCGGGGCCCTGGGAG CGGCTTTGGGCATCCCGGCGCCGGCCCTGGCGCCGGCCGCCCCGGCGCCCTGGCTGTCGGCGAACGCCCTGGGGCGGATG GCCGATATCCTGGCCGCCGACCTGCGGCGCTTGCATCCCGAGGCCGCCCCGCGAATCAGCGCCAATCTTGACGGCCTGAA GCGCGCCCTGCTCGCCCAATCGGCGCGGGCGGCCCAGGCCTTCGCCGGCCTTGCCGATCCTGGCGTGGTGTCGCTCAGCG ACCGCTTCGCCGCCCTGACGCCCGATCTGGGGCTGGATGCGCGCGCCAGTGTCGCCCTGGATGACCGTGAATGGACGCCC GAACGGACTCGGATCCTTGGCGATTTCCTGGTGGGCGAGGCGGTGCGGGTGGTTCTCGCCCATCGCCCGCCGCCGGCCGA GGTGGGGGCGGCGATCAGCGGGGCGGGGGCGAAGCTGGTGATCCTGGACAGCCTGGAAAGCGGTCCGCCGGTCGATGTTC CGGTGGCTTTCGCATCGATCATCGACGCCCTGCTGGCGGCCTTTCCGGCCGATGGCCTTTAA
Upstream 100 bases:
>100_bases TCGACCTGCCCATTCCCTCGGGCGGCGCCATCATCCTGGCCGCCGGCCTTCTTTTCCTTGGGGCGTCCGTCGCCCGCATG CTGTCGCGGAGCAAGCCGTC
Downstream 100 bases:
>100_bases GGGCGTTCAAAAAGGAATTATGCAACCGATGGTTTTTGAGTCACACTTGGCGACGGGAGATAAAAAACCGACGGGAGGAT AAACCCATGTCCAATGCCCT
Product: ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKILALFLSLIAFTLPSAARAEAVILAGHPLTAGLAGALLDGTAVSLRVVVPAALPMGRQAAFLAGRGEKALAEAALGAE AVVSLRSLWPEDPLFPMARRTNIRLVEIDAGRPVDGALPGVAAVRAPSAGALGAALGIPAPALAPAAPAPWLSANALGRM ADILAADLRRLHPEAAPRISANLDGLKRALLAQSARAAQAFAGLADPGVVSLSDRFAALTPDLGLDARASVALDDREWTP ERTRILGDFLVGEAVRVVLAHRPPPAEVGAAISGAGAKLVILDSLESGPPVDVPVAFASIIDALLAAFPADGL
Sequences:
>Translated_313_residues MKILALFLSLIAFTLPSAARAEAVILAGHPLTAGLAGALLDGTAVSLRVVVPAALPMGRQAAFLAGRGEKALAEAALGAE AVVSLRSLWPEDPLFPMARRTNIRLVEIDAGRPVDGALPGVAAVRAPSAGALGAALGIPAPALAPAAPAPWLSANALGRM ADILAADLRRLHPEAAPRISANLDGLKRALLAQSARAAQAFAGLADPGVVSLSDRFAALTPDLGLDARASVALDDREWTP ERTRILGDFLVGEAVRVVLAHRPPPAEVGAAISGAGAKLVILDSLESGPPVDVPVAFASIIDALLAAFPADGL >Mature_313_residues MKILALFLSLIAFTLPSAARAEAVILAGHPLTAGLAGALLDGTAVSLRVVVPAALPMGRQAAFLAGRGEKALAEAALGAE AVVSLRSLWPEDPLFPMARRTNIRLVEIDAGRPVDGALPGVAAVRAPSAGALGAALGIPAPALAPAAPAPWLSANALGRM ADILAADLRRLHPEAAPRISANLDGLKRALLAQSARAAQAFAGLADPGVVSLSDRFAALTPDLGLDARASVALDDREWTP ERTRILGDFLVGEAVRVVLAHRPPPAEVGAAISGAGAKLVILDSLESGPPVDVPVAFASIIDALLAAFPADGL
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31684; Mature: 31684
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILALFLSLIAFTLPSAARAEAVILAGHPLTAGLAGALLDGTAVSLRVVVPAALPMGRQ CHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCC AAFLAGRGEKALAEAALGAEAVVSLRSLWPEDPLFPMARRTNIRLVEIDAGRPVDGALPG EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC VAAVRAPSAGALGAALGIPAPALAPAAPAPWLSANALGRMADILAADLRRLHPEAAPRIS HHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ANLDGLKRALLAQSARAAQAFAGLADPGVVSLSDRFAALTPDLGLDARASVALDDREWTP CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCEEEECCCCCCH ERTRILGDFLVGEAVRVVLAHRPPPAEVGAAISGAGAKLVILDSLESGPPVDVPVAFASI HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCEEEEEEECCCCCCCCCHHHHHHHH IDALLAAFPADGL HHHHHHHCCCCCC >Mature Secondary Structure MKILALFLSLIAFTLPSAARAEAVILAGHPLTAGLAGALLDGTAVSLRVVVPAALPMGRQ CHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCC AAFLAGRGEKALAEAALGAEAVVSLRSLWPEDPLFPMARRTNIRLVEIDAGRPVDGALPG EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC VAAVRAPSAGALGAALGIPAPALAPAAPAPWLSANALGRMADILAADLRRLHPEAAPRIS HHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ANLDGLKRALLAQSARAAQAFAGLADPGVVSLSDRFAALTPDLGLDARASVALDDREWTP CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCEEEECCCCCCH ERTRILGDFLVGEAVRVVLAHRPPPAEVGAAISGAGAKLVILDSLESGPPVDVPVAFASI HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCEEEEEEECCCCCCCCCHHHHHHHH IDALLAAFPADGL HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA