Click here to switch to the map view.

The map label for this gene is nifN [H]

Identifier: 83593620

GI number: 83593620

Start: 2643219

End: 2644616

Strand: Reverse

Name: nifN [H]

Synonym: Rru_A2285

Alternate gene names: 83593620

Gene position: 2644616-2643219 (Counterclockwise)

Preceding gene: 83593621

Following gene: 83593619

Centisome position: 60.76

GC content: 68.03

Gene sequence:

>1398_bases
ATGACCTTGTCCCCCCCCGCCACCCTGGTGCGCTCGCGCAAGGCGCTGACCGTCAGCCCGCTCAAGACCAGCGCCCCCTT
GGGGGCCGCCATGGCTTTCATGGGGATCGACGGCTGTCTGCCGCTGTTCCACGGCGCCCAGGGCTGCACCGCTTTTTCGC
TGGTGATGATGGTTCGCCATTTCCGCGAGGCCATTCCCCTGCAGACCACGGCGATGAACGAGGTCACCACCATCTTGGGT
GGCCTGGAGAACATCGAGCAGGCGCTGCTGAACATCACCAAGCGCACCCATCCCAAGGTGATCGGTCTGATCACCACCGG
GCTGACCGAAACCCGGGGCGAGGACATGGTTGGCGATCTCAAGACCATTCGCCAGCGCAACCCCGTGCTTGACGACACCG
TCGTGGTGCTGACTTCGACGCCCGACTTCTCCGGCGGGCTGGAAACCGGCTGGGGCAAGGCGGTCAGCGCGATGATCGCC
ACCCTGGTGCCCGCCGGCCCGCAGCCGCGCGATGCCGAGCGGGTGACCGTTCTGGCCGGCTGTCACCTGACCCCGGGCGA
TATCGAGGAACTGCGCGACATCATCGAAGCCTTTGGCCTGCGCCCGACCATCCTGCCCGATCTGTCGGGCTCGCTTGATG
GCCATCTGCCCGAAACCTGGGTGCCGACGACCTTGGGCGGCACACCGCTTGAGGAGATCCAGACCCTGGGGCGGGCGGCG
CGGACCATCGCCATTGGCGAGCACATGCGGATTTCCGGCGCCTTGCTCGAAGAACGCACCGGCGTGCCGACCGCCTTCCT
GGATCGGGTGACTGGGCTCGAGGCGGTGGACACCCTGATGAGCCTGCTTGCCGAGATTTCGGGGCGGCCGGTGCCGATGC
GGCTGCGCCGTCAGCGCAGCCAGTTGATCGACGCCCTGATGGACAGCCACTTTTCCTTTGGCGGCACCCGTCTGGCCCTG
GCCGGCGAGCCCGATCTGGTGTGGACGCTGGGCACATTGGTCAGCGGGCTTGGCGCCCGTCTGCAGGCGGTGGTGACCAG
CGTCGACGCCCCCTTTTTGGCCGGGCTGGACACCGAGGAGGTGGTGGTCGGCGATCTGGAGGATCTGGCCGAACGGGCAG
GGGGCTGTGATCTGATGATCGCCAACGCCAATGCCCGGCTGCCGGCCGAACGGGCGGGGGTGGCGCTGTTTCGCGCCGGC
TTCCCGATCCTTGACCGGCTGGGGGTGGCCCACCGGGTGGCGCTAGGCTATCGCGGCACCCGCGACACGGTTTTCGCCCT
GGGCAACGCCCTGATCGAAGCCGCCCAGACCGCTCACGCCCCCACCGCCCATCCGGCCAACACCAATCGGGCAGAGGAGG
GCGCTGATCATGGCCGCTCGCCGCTTGCGCTTGGTTGA

Upstream 100 bases:

>100_bases
ATCCGGTCTGGGCCCAGGTCCGCGCCCCGGCGCCCTGGGATCCGCCGGCGGCCAGCCCCGGCGTCACGCCGCTGATCCCC
GCCGGTCGGAGGGCCGCGCC

Downstream 100 bases:

>100_bases
GGCCGGTCCCGATCGGGGTTCCGTTACAGGAGGACGCATGAAAGTCGCGCTCGCTACCCAGGACATGAAGACCGTCAACG
CCCATTTCAACGGCGCCCGC

Product: nitrogenase molybdenum-cofactor biosynthesis protein NifN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTLSPPATLVRSRKALTVSPLKTSAPLGAAMAFMGIDGCLPLFHGAQGCTAFSLVMMVRHFREAIPLQTTAMNEVTTILG
GLENIEQALLNITKRTHPKVIGLITTGLTETRGEDMVGDLKTIRQRNPVLDDTVVVLTSTPDFSGGLETGWGKAVSAMIA
TLVPAGPQPRDAERVTVLAGCHLTPGDIEELRDIIEAFGLRPTILPDLSGSLDGHLPETWVPTTLGGTPLEEIQTLGRAA
RTIAIGEHMRISGALLEERTGVPTAFLDRVTGLEAVDTLMSLLAEISGRPVPMRLRRQRSQLIDALMDSHFSFGGTRLAL
AGEPDLVWTLGTLVSGLGARLQAVVTSVDAPFLAGLDTEEVVVGDLEDLAERAGGCDLMIANANARLPAERAGVALFRAG
FPILDRLGVAHRVALGYRGTRDTVFALGNALIEAAQTAHAPTAHPANTNRAEEGADHGRSPLALG

Sequences:

>Translated_465_residues
MTLSPPATLVRSRKALTVSPLKTSAPLGAAMAFMGIDGCLPLFHGAQGCTAFSLVMMVRHFREAIPLQTTAMNEVTTILG
GLENIEQALLNITKRTHPKVIGLITTGLTETRGEDMVGDLKTIRQRNPVLDDTVVVLTSTPDFSGGLETGWGKAVSAMIA
TLVPAGPQPRDAERVTVLAGCHLTPGDIEELRDIIEAFGLRPTILPDLSGSLDGHLPETWVPTTLGGTPLEEIQTLGRAA
RTIAIGEHMRISGALLEERTGVPTAFLDRVTGLEAVDTLMSLLAEISGRPVPMRLRRQRSQLIDALMDSHFSFGGTRLAL
AGEPDLVWTLGTLVSGLGARLQAVVTSVDAPFLAGLDTEEVVVGDLEDLAERAGGCDLMIANANARLPAERAGVALFRAG
FPILDRLGVAHRVALGYRGTRDTVFALGNALIEAAQTAHAPTAHPANTNRAEEGADHGRSPLALG
>Mature_464_residues
TLSPPATLVRSRKALTVSPLKTSAPLGAAMAFMGIDGCLPLFHGAQGCTAFSLVMMVRHFREAIPLQTTAMNEVTTILGG
LENIEQALLNITKRTHPKVIGLITTGLTETRGEDMVGDLKTIRQRNPVLDDTVVVLTSTPDFSGGLETGWGKAVSAMIAT
LVPAGPQPRDAERVTVLAGCHLTPGDIEELRDIIEAFGLRPTILPDLSGSLDGHLPETWVPTTLGGTPLEEIQTLGRAAR
TIAIGEHMRISGALLEERTGVPTAFLDRVTGLEAVDTLMSLLAEISGRPVPMRLRRQRSQLIDALMDSHFSFGGTRLALA
GEPDLVWTLGTLVSGLGARLQAVVTSVDAPFLAGLDTEEVVVGDLEDLAERAGGCDLMIANANARLPAERAGVALFRAGF
PILDRLGVAHRVALGYRGTRDTVFALGNALIEAAQTAHAPTAHPANTNRAEEGADHGRSPLALG

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005975 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 49122; Mature: 48991

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00699 NITROGENASE_1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSPPATLVRSRKALTVSPLKTSAPLGAAMAFMGIDGCLPLFHGAQGCTAFSLVMMVRH
CCCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
FREAIPLQTTAMNEVTTILGGLENIEQALLNITKRTHPKVIGLITTGLTETRGEDMVGDL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
KTIRQRNPVLDDTVVVLTSTPDFSGGLETGWGKAVSAMIATLVPAGPQPRDAERVTVLAG
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
CHLTPGDIEELRDIIEAFGLRPTILPDLSGSLDGHLPETWVPTTLGGTPLEEIQTLGRAA
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RTIAIGEHMRISGALLEERTGVPTAFLDRVTGLEAVDTLMSLLAEISGRPVPMRLRRQRS
HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QLIDALMDSHFSFGGTRLALAGEPDLVWTLGTLVSGLGARLQAVVTSVDAPFLAGLDTEE
HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCH
VVVGDLEDLAERAGGCDLMIANANARLPAERAGVALFRAGFPILDRLGVAHRVALGYRGT
HHHCCHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCC
RDTVFALGNALIEAAQTAHAPTAHPANTNRAEEGADHGRSPLALG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHCCCCCCCCC
>Mature Secondary Structure 
TLSPPATLVRSRKALTVSPLKTSAPLGAAMAFMGIDGCLPLFHGAQGCTAFSLVMMVRH
CCCCHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
FREAIPLQTTAMNEVTTILGGLENIEQALLNITKRTHPKVIGLITTGLTETRGEDMVGDL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
KTIRQRNPVLDDTVVVLTSTPDFSGGLETGWGKAVSAMIATLVPAGPQPRDAERVTVLAG
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
CHLTPGDIEELRDIIEAFGLRPTILPDLSGSLDGHLPETWVPTTLGGTPLEEIQTLGRAA
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RTIAIGEHMRISGALLEERTGVPTAFLDRVTGLEAVDTLMSLLAEISGRPVPMRLRRQRS
HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QLIDALMDSHFSFGGTRLALAGEPDLVWTLGTLVSGLGARLQAVVTSVDAPFLAGLDTEE
HHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCH
VVVGDLEDLAERAGGCDLMIANANARLPAERAGVALFRAGFPILDRLGVAHRVALGYRGT
HHHCCHHHHHHHCCCCEEEEECCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCC
RDTVFALGNALIEAAQTAHAPTAHPANTNRAEEGADHGRSPLALG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]