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The map label for this gene is mcp1 [H]

Identifier: 83593477

GI number: 83593477

Start: 2486210

End: 2487667

Strand: Direct

Name: mcp1 [H]

Synonym: Rru_A2142

Alternate gene names: 83593477

Gene position: 2486210-2487667 (Clockwise)

Preceding gene: 83593475

Following gene: 83593480

Centisome position: 57.12

GC content: 68.24

Gene sequence:

>1458_bases
ATGACCACCGAACTCGCCTTCATCCGCCTGAGTGTCTTGCGCCTCTTTATGGTTTTTCTGCTTTTGCAGGCGGCCGCGGT
TCCGGTCGCCGGGTGGATTTCGGGAGCGGAGATCCTGCCCGGGCTACTGGTCGCCGTGCCCATCGCCTTGGCTCCGATCG
CCCTGGTCCTGCTGACCGGCGACACCCCCGCCAGCCGCAGCATCATGGGCGTCGGCCTGATGATCCAGGTCGGGGTTCTC
ATCTTCATGTTTCGCGGCCATCCCTGGCAGAGCGACATCCACCTGTATTTCTTCGCCGGCCTCGCCACCCTCGTCGCCCT
TTGTGACGCCACGGTGATCCTTGCCGCCGCCCTAACCATCATCGCCCACAATCTGATTCTGACCTACGCCATGCCGGCCT
GGATCTTCCCCCAGGGCGCCGACCTGGGCCGGGTGACCCTGCATGCCATGGTCGTGGTCGTCGAAGGCGCGACCCTGGTC
TGGGTGGCGCGGCGTCTGGCCCGGGCCTTCGCCGCCACCGAACAGGCGGTGGTCGAGGCCAATACCGCCCGCGAGGATAC
CCGCAAGGCCGCCGAGGAGCGCCTGCGCCTGGAAGCCGCCGCCGCCGAGGCCCAGGTCAGCGCCGTGCGCGGCGTCGCCG
ATGATCTCGAAGGGTCGGTCGGCGCGGCTTTGGGCGCCTTGAAGAACGGCACCGCCGCCATGCACCAGGCCGCCGAAGCC
CTGGACGATTCGTCGGAAAACTCGCGGCAGGTGTCCTCTATGGCCCGTGATCTGTCCGGGCGCACGGCCGAAGGCGTTGA
ATCGATGGCCCAGGCGGCGCGGACGATGACCCAATCGGTGTCGGGCATCCTTGAAAGCGTCCGTCACTCCGACACCCTAT
CGCGCTCCGCCCTGACCGATGCCGAGCGGGCGACGGAAAAGGTCGCGGCGCTGAGCACGGCGGCCGAGCGGATCGGCGAG
GTGGTCGGGCTGATCAGCGCCGTCGCCGCCCAGACCAATCTGCTGGCCCTGAACGCGACGATCGAGGCGGCGCGGGCCGG
CGATGCCGGCAAGGGCTTCGCCGTGGTCGCCAATGAGGTGAAGACCCTGGCCACCCAAACGGCGCGGGCGACCGACGAGA
TCGCCGCCCAGGTGACCGGCATCCAGGGGGCGACCCGCGACTCAGCGGCCGTCATCGCCACCATCAGCCGCAGCATGACC
GACATCAGCACCACCGTCTCGGCCATCGCCGCCGCCATGGAAGATCAGGGACAAGCCAGTCGGCTGGTCGCCGGAACCAT
CGACGCGGTATCGACCCTCGCCCATGAGCTTGGCGAGGTGATCTCCCGCATGGACAGCCTGACCGGCGACTTCTCGGCCA
ATGCCGCCACCATGCGCGGTCTGTCCGATCACGCCGTCGACGAGATCGATCGCCTTGATGAATCGGTGGTCGCCTTCGTC
GGCCGCCTGCGCGCCTGA

Upstream 100 bases:

>100_bases
CCCCGTCCCCGGTCCCCCGCCGACGGAAATCGGCGTTCCTTTGGTTCTTGATCCGCTGGCGCCCTATGGCTGCGCTCCCA
CGGGCAGGAGATACCCCCCC

Downstream 100 bases:

>100_bases
GCGCCCGGGCAAAGGCGGCGCCCGCAGAGCGAACCGCGTTAAAGGACCCCCCTTTAACGCGGCGGCTCTAGCGGCGGTCG
CCTCCCCTCACCGCGCCATG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTTELAFIRLSVLRLFMVFLLLQAAAVPVAGWISGAEILPGLLVAVPIALAPIALVLLTGDTPASRSIMGVGLMIQVGVL
IFMFRGHPWQSDIHLYFFAGLATLVALCDATVILAAALTIIAHNLILTYAMPAWIFPQGADLGRVTLHAMVVVVEGATLV
WVARRLARAFAATEQAVVEANTAREDTRKAAEERLRLEAAAAEAQVSAVRGVADDLEGSVGAALGALKNGTAAMHQAAEA
LDDSSENSRQVSSMARDLSGRTAEGVESMAQAARTMTQSVSGILESVRHSDTLSRSALTDAERATEKVAALSTAAERIGE
VVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMT
DISTTVSAIAAAMEDQGQASRLVAGTIDAVSTLAHELGEVISRMDSLTGDFSANAATMRGLSDHAVDEIDRLDESVVAFV
GRLRA

Sequences:

>Translated_485_residues
MTTELAFIRLSVLRLFMVFLLLQAAAVPVAGWISGAEILPGLLVAVPIALAPIALVLLTGDTPASRSIMGVGLMIQVGVL
IFMFRGHPWQSDIHLYFFAGLATLVALCDATVILAAALTIIAHNLILTYAMPAWIFPQGADLGRVTLHAMVVVVEGATLV
WVARRLARAFAATEQAVVEANTAREDTRKAAEERLRLEAAAAEAQVSAVRGVADDLEGSVGAALGALKNGTAAMHQAAEA
LDDSSENSRQVSSMARDLSGRTAEGVESMAQAARTMTQSVSGILESVRHSDTLSRSALTDAERATEKVAALSTAAERIGE
VVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMT
DISTTVSAIAAAMEDQGQASRLVAGTIDAVSTLAHELGEVISRMDSLTGDFSANAATMRGLSDHAVDEIDRLDESVVAFV
GRLRA
>Mature_484_residues
TTELAFIRLSVLRLFMVFLLLQAAAVPVAGWISGAEILPGLLVAVPIALAPIALVLLTGDTPASRSIMGVGLMIQVGVLI
FMFRGHPWQSDIHLYFFAGLATLVALCDATVILAAALTIIAHNLILTYAMPAWIFPQGADLGRVTLHAMVVVVEGATLVW
VARRLARAFAATEQAVVEANTAREDTRKAAEERLRLEAAAAEAQVSAVRGVADDLEGSVGAALGALKNGTAAMHQAAEAL
DDSSENSRQVSSMARDLSGRTAEGVESMAQAARTMTQSVSGILESVRHSDTLSRSALTDAERATEKVAALSTAAERIGEV
VGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEVKTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTD
ISTTVSAIAAAMEDQGQASRLVAGTIDAVSTLAHELGEVISRMDSLTGDFSANAATMRGLSDHAVDEIDRLDESVVAFVG
RLRA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=210, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787690, Length=283, Percent_Identity=31.095406360424, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI2367378, Length=243, Percent_Identity=29.2181069958848, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=163, Percent_Identity=31.2883435582822, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50347; Mature: 50216

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTELAFIRLSVLRLFMVFLLLQAAAVPVAGWISGAEILPGLLVAVPIALAPIALVLLTG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEC
DTPASRSIMGVGLMIQVGVLIFMFRGHPWQSDIHLYFFAGLATLVALCDATVILAAALTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAHNLILTYAMPAWIFPQGADLGRVTLHAMVVVVEGATLVWVARRLARAFAATEQAVVEA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NTAREDTRKAAEERLRLEAAAAEAQVSAVRGVADDLEGSVGAALGALKNGTAAMHQAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH
LDDSSENSRQVSSMARDLSGRTAEGVESMAQAARTMTQSVSGILESVRHSDTLSRSALTD
HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHH
KTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTDISTTVSAIAAAMEDQGQAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLVAGTIDAVSTLAHELGEVISRMDSLTGDFSANAATMRGLSDHAVDEIDRLDESVVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
GRLRA
HHHCC
>Mature Secondary Structure 
TTELAFIRLSVLRLFMVFLLLQAAAVPVAGWISGAEILPGLLVAVPIALAPIALVLLTG
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEC
DTPASRSIMGVGLMIQVGVLIFMFRGHPWQSDIHLYFFAGLATLVALCDATVILAAALTI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAHNLILTYAMPAWIFPQGADLGRVTLHAMVVVVEGATLVWVARRLARAFAATEQAVVEA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
NTAREDTRKAAEERLRLEAAAAEAQVSAVRGVADDLEGSVGAALGALKNGTAAMHQAAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH
LDDSSENSRQVSSMARDLSGRTAEGVESMAQAARTMTQSVSGILESVRHSDTLSRSALTD
HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERATEKVAALSTAAERIGEVVGLISAVAAQTNLLALNATIEAARAGDAGKGFAVVANEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHH
KTLATQTARATDEIAAQVTGIQGATRDSAAVIATISRSMTDISTTVSAIAAAMEDQGQAS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLVAGTIDAVSTLAHELGEVISRMDSLTGDFSANAATMRGLSDHAVDEIDRLDESVVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
GRLRA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]