| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593472
Identifier: 83593472
GI number: 83593472
Start: 2482912
End: 2483514
Strand: Reverse
Name: 83593472
Synonym: Rru_A2137
Alternate gene names: NA
Gene position: 2483514-2482912 (Counterclockwise)
Preceding gene: 83593473
Following gene: 83593471
Centisome position: 57.06
GC content: 69.32
Gene sequence:
>603_bases ATGATGTCTCGCCTCAGCTCCGCGCCGCCCCCGGCGGCGGCCCGCGTGGACGCCCTGGTCGCCGACATCCTGGCCCGTGA AGGCGGTTATGGCGCCGATCCCGCCGATCGGGGCGGGGCGACCAATCACGGGATCAGCTTGCGCTATGCCCAAGGGATCG GCCTCGATCTCGACGGCGATGGCGATACGGATAAGGACGATATCGTGCTGGTCACCCGCGATCGCGCCGCCGCGCTGTAT CGCCGCGACTTCTTTTACGGGCCCCGGCTGCATGCGCTGCCCTGCTCCTTGTGGCCGGTGCTGTTCGACTGGGCGGTGCA TAGCGGTCCGGCCCGCGCCGTGATCGGCTTGCAAAGCGTGCTCAATCAAACGCGCCGCGCCGGGGTGGCGGGCTTCGACA GCCTGGACGAGGATGGGCGCATCGGCGCGCGAACCCGCAAGGCCGCCGAAATCGCCGAGGCCGCCTTGGGCGGCTTTCTG GTCAACGCCCTGGTCGAAGAGCGGCTCGCCCTGCTGCGTCGGCTGGTGGCCAATGATCCCCGGCTGCGCGGCTTCCTCAA GGGCTGGATCGCCCGGGTTCTGACCTTTCGCGTGGAGGTCTGA
Upstream 100 bases:
>100_bases GGATCGGCAACGCCCTGGGGCGGGGCGGGGTGGCGCTGAAGGCCCTTTCCGCCGCCGCGCCCGATCTTCTCAAGCCAGAT GATTTCAAGGAGGAAACGAC
Downstream 100 bases:
>100_bases ATGTGGGACAGGATTCTGGGACTGCTGGGGGCGGGCGGGCTTTCGGCGGTGAAGGCGCTGGTGGGGCGCTTCGTCGCCGA TAAGGACGCGGCGGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MMSRLSSAPPPAAARVDALVADILAREGGYGADPADRGGATNHGISLRYAQGIGLDLDGDGDTDKDDIVLVTRDRAAALY RRDFFYGPRLHALPCSLWPVLFDWAVHSGPARAVIGLQSVLNQTRRAGVAGFDSLDEDGRIGARTRKAAEIAEAALGGFL VNALVEERLALLRRLVANDPRLRGFLKGWIARVLTFRVEV
Sequences:
>Translated_200_residues MMSRLSSAPPPAAARVDALVADILAREGGYGADPADRGGATNHGISLRYAQGIGLDLDGDGDTDKDDIVLVTRDRAAALY RRDFFYGPRLHALPCSLWPVLFDWAVHSGPARAVIGLQSVLNQTRRAGVAGFDSLDEDGRIGARTRKAAEIAEAALGGFL VNALVEERLALLRRLVANDPRLRGFLKGWIARVLTFRVEV >Mature_200_residues MMSRLSSAPPPAAARVDALVADILAREGGYGADPADRGGATNHGISLRYAQGIGLDLDGDGDTDKDDIVLVTRDRAAALY RRDFFYGPRLHALPCSLWPVLFDWAVHSGPARAVIGLQSVLNQTRRAGVAGFDSLDEDGRIGARTRKAAEIAEAALGGFL VNALVEERLALLRRLVANDPRLRGFLKGWIARVLTFRVEV
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21559; Mature: 21559
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRLSSAPPPAAARVDALVADILAREGGYGADPADRGGATNHGISLRYAQGIGLDLDGD CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCC GDTDKDDIVLVTRDRAAALYRRDFFYGPRLHALPCSLWPVLFDWAVHSGPARAVIGLQSV CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH LNQTRRAGVAGFDSLDEDGRIGARTRKAAEIAEAALGGFLVNALVEERLALLRRLVANDP HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLRGFLKGWIARVLTFRVEV HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSRLSSAPPPAAARVDALVADILAREGGYGADPADRGGATNHGISLRYAQGIGLDLDGD CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCC GDTDKDDIVLVTRDRAAALYRRDFFYGPRLHALPCSLWPVLFDWAVHSGPARAVIGLQSV CCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH LNQTRRAGVAGFDSLDEDGRIGARTRKAAEIAEAALGGFLVNALVEERLALLRRLVANDP HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLRGFLKGWIARVLTFRVEV HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA