| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gltK [H]
Identifier: 83593424
GI number: 83593424
Start: 2417532
End: 2418224
Strand: Direct
Name: gltK [H]
Synonym: Rru_A2089
Alternate gene names: 83593424
Gene position: 2417532-2418224 (Clockwise)
Preceding gene: 83593423
Following gene: 83593425
Centisome position: 55.54
GC content: 60.89
Gene sequence:
>693_bases ATGTTCGCAACCCTCGACTTCGATGTCATCGCCCGCTCGATCGGCTATCTGTTCTATGACGGGATGACCTTCACCCTGGG GCTGACCTTGCTCGGCACCCTGGCCGGCGGGCTGCTTGGCACGGCCTTGGCCATGCTGCGGCTGTCCAGCCTGCCCGTTC TTCCCCATCTGGCGACGCTCTATATCAATCTGATGCGCTCGATGCCGCTGGTTCTGTTGATTTTCTGGGTCTACTTCATG GTCCCCTATCTGGGGCAATGGATCTTGGGAACCGATCGGCCGATGCAGGTCGGCACCTTCACCTCGTCGCTGCTAACCTT CACCCTGTTCGAAGCGGCCTATTTCGCCGAGATCATGCGCTCGGGCATCCAATCGGTCTCGCGCGGGCAGACGGCGGCGG CCCAGGCCCTTGGCCTCACCTATTTCCAGTCGATGGGCCATGTGGTGCTGCCCCAGGCGTTCCGTGCCATGCTGCCGGTG CTTCTGACCCAGGTGATCGTGTTATTTCAGGACACCTCGCTGGTCTATGTGCTGTCGATCACCGATTTCCTTGGTGCGGC GAGCAAAGTGGCGCAGCGCGATGGCCGGCTGGTCGAAATGTACCTTTTCGCCGCCGTCGTCTATTTCGCCATCTCGTTCG CCGCCTCGCTGTTGGTCAAGCGCATTCAGGCGCGCACCGCTATCATTCGCTGA
Upstream 100 bases:
>100_bases TCTACGTTCTGATCAACGTGGTGGTGGTCGCCGTCATGCGTGTGATCGAGCATCGTGTCGCGGTGCCCGGTTTCAACGTC GGCAAGTAAGGAAAACGCCG
Downstream 100 bases:
>100_bases TGAAGGCCCCAGAGATGATCGAAATCACCCACGTTGATAAATGGTATGGGACCTTTCAGGTTCTGAAGGATTGCACCACC CAGGTTGCCAAGGGCGAGGT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MFATLDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATLYINLMRSMPLVLLIFWVYFM VPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPV LLTQVIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAIIR
Sequences:
>Translated_230_residues MFATLDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATLYINLMRSMPLVLLIFWVYFM VPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPV LLTQVIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAIIR >Mature_230_residues MFATLDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATLYINLMRSMPLVLLIFWVYFM VPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPV LLTQVIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAIIR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=52.2522522522522, Blast_Score=216, Evalue=8e-58, Organism=Escherichia coli, GI87082239, Length=212, Percent_Identity=32.0754716981132, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=32.0388349514563, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=29.9065420560748, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786874, Length=199, Percent_Identity=29.6482412060301, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1787087, Length=130, Percent_Identity=32.3076923076923, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI48994930, Length=166, Percent_Identity=30.7228915662651, Blast_Score=74, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25353; Mature: 25353
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFATLDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATL CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH YINLMRSMPLVLLIFWVYFMVPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMR HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVLLTQVIVLFQDTSLVYVLSI HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH TDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAIIR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFATLDFDVIARSIGYLFYDGMTFTLGLTLLGTLAGGLLGTALAMLRLSSLPVLPHLATL CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH YINLMRSMPLVLLIFWVYFMVPYLGQWILGTDRPMQVGTFTSSLLTFTLFEAAYFAEIMR HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVLLTQVIVLFQDTSLVYVLSI HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH TDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQARTAIIR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]