| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gltI [H]
Identifier: 83593422
GI number: 83593422
Start: 2415762
End: 2416679
Strand: Direct
Name: gltI [H]
Synonym: Rru_A2087
Alternate gene names: 83593422
Gene position: 2415762-2416679 (Clockwise)
Preceding gene: 83593421
Following gene: 83593423
Centisome position: 55.5
GC content: 62.09
Gene sequence:
>918_bases ATGTCGTTCAAACACGTTGTGGCCCTGGCGGCCGCCTTCGGCCTGCTGGCCGGCTCGGCCAGCGCCGAGGAACTGACTGG AACGCTGAAGAAGATCAAGGAAACCGGTGAAATCGCCATCGGTCACCGGGATTCCTCGATCCCCTTCTCCTATCTCGACG ATAATCAGAAGCCGATCGGCTATGCCATGGACATCTGCGCCCATGTCGTCGAGGCGGTGAAGGCCGAACTGAAGCTCGAT ACCCTGGCCGTCAAGCTGACGCCGGTGACCTCGGCCACCCGTATTCCGCTGATCGCCAATGGCACCGTCGATCTGGAATG CGGCTCGACCACCAACAACCTCGATCGCCAGCAGCAGGCCAGCTTCACCAACAGCCATTTCCTGACCGCCAGCCGCTTTG TTTCCAAGAAGACCAGTAATCTCAAGTCGATCGACGACCTGAAGGGCAAGACCGTGGTGTCGACCGCCGGCACCACCAAC ATCAAGCAGGTCAACGAGCTCAACACCGCCCGCGGGCTCGGCATCAAGATCATCCCGGCCAAGGATCACGCCGAGGGCTT CTTGATGGTCGAAACCGATCGCGCCGTCGCCTTCGCCATGGACGACATCCTGCTCGCCACCCTGGTCGCCGGATCGAAGA CCCCGTCGGCCTATGTCATCTCGGAAGACGCCTTCTCGCTGCCCGAGCCCTACGGCATCATGCTGCGCAAGGATGACCCC GCCTTCAAGGCGGTGGTCGATCGGGCCACGGCGGCGCTTTACACCAGCCCCGAAGGCCCCAAGCTGTTTGCCAAGTGGTT TGAGAACCCCATTCCGCCCAAGGGCCTCAACGTCAACCTGCCTTTGGCCGGCGCCATGAAGAACGCCCTCGCCCATCCCA GCGATTCGGCCGACCCCAAGGCCTATCTGGCCCCGTAA
Upstream 100 bases:
>100_bases CGGCAGCCTGTCGGCGGGGCTTTATTTTTGTCATCGATCCAAAGTCTCGAGCCGCGTCGCTCAATCGTGGCCGGATTTCA ACGAGCATGAGGAGACCAAG
Downstream 100 bases:
>100_bases AGCCGGTCAAGGCCCCTAGGATAAGGCTCACCGGGCTCACCGGGGCGGTTCGCGCCCCGCCCGGTGGGCCCCCTCCGCGC GCCCCCGCGCTCCGACGGAG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKLD TLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTN IKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPKAYLAP
Sequences:
>Translated_305_residues MSFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKLD TLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTN IKQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPKAYLAP >Mature_304_residues SFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIGYAMDICAHVVEAVKAELKLDT LAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQASFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTNI KQVNELNTARGLGIKIIPAKDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDPA FKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPKAYLAP
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=49.2592592592593, Blast_Score=268, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32455; Mature: 32324
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIG CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHH YAMDICAHVVEAVKAELKLDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQA HHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCHHHHH SFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPA CCCCCCEEHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC KDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP CCCCCEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCH AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPK HHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCC AYLAP EECCC >Mature Secondary Structure SFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIG CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHH YAMDICAHVVEAVKAELKLDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQA HHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEEECCEEEEEECCCCCCCCHHHHH SFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPA CCCCCCEEHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC KDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP CCCCCEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCH AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPK HHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCC AYLAP EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]