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The map label for this gene is ycfQ [C]

Identifier: 83593384

GI number: 83593384

Start: 2369441

End: 2370037

Strand: Reverse

Name: ycfQ [C]

Synonym: Rru_A2049

Alternate gene names: 83593384

Gene position: 2370037-2369441 (Counterclockwise)

Preceding gene: 83593389

Following gene: 83593383

Centisome position: 54.45

GC content: 59.46

Gene sequence:

>597_bases
ATGCTTCATGTGGCTTGGCGCATGTTTCTTGAAAAGGGGTACGAGGCCGTTAGTCTGAGCGATGTCGTTTCGCAATCGGG
CGGGTCGAAGGCCACCCTCTATGCGGCTTTCGGCGGCAAGGAAGGGTTGTTCATAGCCGCCTGCGAGGAACGTTGCGCCG
CCTTCCTTGATAAGCTGGCGCTTTCCGCCGACCCTTTGCTGCCGGTTGAGGAATCGCTTCGGCATTTCGCCTTGTCGCTC
CTGGAAAATTTATATTCCGATGAGAGCCGTGACGTGATGCGGCTGATTCTTGGCGCGGCGCAGAAGTTTCCCTCGGTCGC
CGAGGCTTTTTTAGAACGCGGCCCCGGACAGGTGCGGCGCCGGCTCGAGGAGTATCTGGCCTGGGTCGATCGCAGCGGCC
TGCTTGAGATCGACAACCCGAGAATCGCCGCCGAGGTGTTTTTGTCGATGGTCCAGGGGCGATGGTATCTGATCGCCCTG
GATTCCCGGCGCCGTCAGGTCGTGAATGACGAGGATTTGGCCACGATTCTTGAGCATGTGCGGGTTTTCATCCGCGGCTA
CCGTCCGCGCGATGCCGGCGAGCGGTCGAAATTTTAA

Upstream 100 bases:

>100_bases
CGTACAAGAGCCAAAAAGTCGCGGCGGTGAAAAAGGAGGTGACGAGGCGTTGGAAAAAAGGGGATCTCCCTGCGGGCGGG
GAGACGCGCGGCGGGCTGCC

Downstream 100 bases:

>100_bases
ACTCTATCGCGCAGAATTCCCGGTATGGTGGTGGTTTATTCGCGGGCATCCTGCAAAAATAATGGGCATTAGGGCGGTTC
TTGCGGGTTTCGCCCGTATT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Bacterial Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulatory Protein; TetR-Type Transcriptional Regulator; Transcriptional Regulator TetR/AcrR Family; TetR Family Regulatory Protein; Transcriptional Regulator TetR; TetR Family Regulatory; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLHVAWRMFLEKGYEAVSLSDVVSQSGGSKATLYAAFGGKEGLFIAACEERCAAFLDKLALSADPLLPVEESLRHFALSL
LENLYSDESRDVMRLILGAAQKFPSVAEAFLERGPGQVRRRLEEYLAWVDRSGLLEIDNPRIAAEVFLSMVQGRWYLIAL
DSRRRQVVNDEDLATILEHVRVFIRGYRPRDAGERSKF

Sequences:

>Translated_198_residues
MLHVAWRMFLEKGYEAVSLSDVVSQSGGSKATLYAAFGGKEGLFIAACEERCAAFLDKLALSADPLLPVEESLRHFALSL
LENLYSDESRDVMRLILGAAQKFPSVAEAFLERGPGQVRRRLEEYLAWVDRSGLLEIDNPRIAAEVFLSMVQGRWYLIAL
DSRRRQVVNDEDLATILEHVRVFIRGYRPRDAGERSKF
>Mature_198_residues
MLHVAWRMFLEKGYEAVSLSDVVSQSGGSKATLYAAFGGKEGLFIAACEERCAAFLDKLALSADPLLPVEESLRHFALSL
LENLYSDESRDVMRLILGAAQKFPSVAEAFLERGPGQVRRRLEEYLAWVDRSGLLEIDNPRIAAEVFLSMVQGRWYLIAL
DSRRRQVVNDEDLATILEHVRVFIRGYRPRDAGERSKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22367; Mature: 22367

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHVAWRMFLEKGYEAVSLSDVVSQSGGSKATLYAAFGGKEGLFIAACEERCAAFLDKLA
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHH
LSADPLLPVEESLRHFALSLLENLYSDESRDVMRLILGAAQKFPSVAEAFLERGPGQVRR
HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
RLEEYLAWVDRSGLLEIDNPRIAAEVFLSMVQGRWYLIALDSRRRQVVNDEDLATILEHV
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHHHHH
RVFIRGYRPRDAGERSKF
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLHVAWRMFLEKGYEAVSLSDVVSQSGGSKATLYAAFGGKEGLFIAACEERCAAFLDKLA
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHH
LSADPLLPVEESLRHFALSLLENLYSDESRDVMRLILGAAQKFPSVAEAFLERGPGQVRR
HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH
RLEEYLAWVDRSGLLEIDNPRIAAEVFLSMVQGRWYLIALDSRRRQVVNDEDLATILEHV
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHHHHH
RVFIRGYRPRDAGERSKF
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA