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The map label for this gene is yfhR [C]

Identifier: 83593374

GI number: 83593374

Start: 2358530

End: 2359369

Strand: Reverse

Name: yfhR [C]

Synonym: Rru_A2039

Alternate gene names: 83593374

Gene position: 2359369-2358530 (Counterclockwise)

Preceding gene: 83593375

Following gene: 83593372

Centisome position: 54.2

GC content: 70.48

Gene sequence:

>840_bases
ATGGGGTTCGTGTTGTGCCTCCTCGCCCTTCCTTTGGCCTTATGGCTGATCGCCTGTCTGGCCTTGGTGATCTTCCAGCG
CGCCTTGCAATACCGCCCCTCGCTTGACCCGCTGCCCGATCCGGCGGCCGCCGGCCTTGCTGGGGCGCGCGGGGTGGTCT
TGTTCCCCCTTGATGGCCTGTCCCTGACCGCCTGGTATCTGCCGCCGCCGCCTTCGGCCGAGCCGCCCCGGGCAGTGGCG
CTGTTCCATGGCAATGCCGGATCGCTGATCGAGCGCGTCCATAAGGCCCGCATGCTGGCCGGCGAGGGGCTGGGGGTGCT
GATGGTCGAATGGCGCGGCTATGGCGGCAACCCCGGCCGACCGACCGAGGCCGGGCTGCTGGCCGATGGCCGGGCGGCGA
TCGCCTTTCTGGAAGCCCAGGGCATCGATCGCGCCCGGCAGATCTTCTATGGCGAGAGCCTGGGCTCGGGTGTCGCCTTC
CACCTCGCCGCCGAGGGGCCGGCCCCGGCGGCGGTCATCACCGAGGGCGCCTTCACCCGCGCCGTCGATGTCGGGGCGCG
GCGCTATCGGTGGATGCCGGTGCGCCTCTTGATGCGCGACCGCTTCGACAGTCTGGCCGCAGCACAGCGCGTCACCTGCC
CGGTGCTGATCCTGCATGGCCGCCAGGACGGCGTCGTGCCCTTCGACATGGGTCCGACCCTGGCAAGTGCCGTGGCCGGC
AAGGTCAGCACCTTCTTCCCCGACCAGGGCGGCCACGTCGATCTGCTTGATCACGGCGCCCAACCGGTGATCGCCGGGTT
CCTGCGCGAGGGGGCCGGCGGCGCTTTCAGGCTTCCCTAA

Upstream 100 bases:

>100_bases
ATCTTGATCAATTCATGGCCGCGTCGCTGGCCGCCCGCATCGTCGGCGCCGGCGACGCCATGGCCGATATCGCCAAGTAA
GATCCGGAACGGGGGCGGGG

Downstream 100 bases:

>100_bases
AGCGCCCGAGCCTCCTCAAGGACGGCGGCCACGTGGCCGGCGACTTTGACCTTGCGCCAGATCTTGCGGATGATGCCCTC
GCCGTCGATCAGGAAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGFVLCLLALPLALWLIACLALVIFQRALQYRPSLDPLPDPAAAGLAGARGVVLFPLDGLSLTAWYLPPPPSAEPPRAVA
LFHGNAGSLIERVHKARMLAGEGLGVLMVEWRGYGGNPGRPTEAGLLADGRAAIAFLEAQGIDRARQIFYGESLGSGVAF
HLAAEGPAPAAVITEGAFTRAVDVGARRYRWMPVRLLMRDRFDSLAAAQRVTCPVLILHGRQDGVVPFDMGPTLASAVAG
KVSTFFPDQGGHVDLLDHGAQPVIAGFLREGAGGAFRLP

Sequences:

>Translated_279_residues
MGFVLCLLALPLALWLIACLALVIFQRALQYRPSLDPLPDPAAAGLAGARGVVLFPLDGLSLTAWYLPPPPSAEPPRAVA
LFHGNAGSLIERVHKARMLAGEGLGVLMVEWRGYGGNPGRPTEAGLLADGRAAIAFLEAQGIDRARQIFYGESLGSGVAF
HLAAEGPAPAAVITEGAFTRAVDVGARRYRWMPVRLLMRDRFDSLAAAQRVTCPVLILHGRQDGVVPFDMGPTLASAVAG
KVSTFFPDQGGHVDLLDHGAQPVIAGFLREGAGGAFRLP
>Mature_278_residues
GFVLCLLALPLALWLIACLALVIFQRALQYRPSLDPLPDPAAAGLAGARGVVLFPLDGLSLTAWYLPPPPSAEPPRAVAL
FHGNAGSLIERVHKARMLAGEGLGVLMVEWRGYGGNPGRPTEAGLLADGRAAIAFLEAQGIDRARQIFYGESLGSGVAFH
LAAEGPAPAAVITEGAFTRAVDVGARRYRWMPVRLLMRDRFDSLAAAQRVTCPVLILHGRQDGVVPFDMGPTLASAVAGK
VSTFFPDQGGHVDLLDHGAQPVIAGFLREGAGGAFRLP

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

Organism=Homo sapiens, GI109689718, Length=279, Percent_Identity=27.2401433691756, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI24308097, Length=279, Percent_Identity=27.2401433691756, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI49355781, Length=268, Percent_Identity=26.4925373134328, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI71051602, Length=158, Percent_Identity=30.379746835443, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI71051600, Length=158, Percent_Identity=30.379746835443, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI226510965, Length=261, Percent_Identity=25.2873563218391, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137566, Length=293, Percent_Identity=28.6689419795222, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 29414; Mature: 29282

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFVLCLLALPLALWLIACLALVIFQRALQYRPSLDPLPDPAAAGLAGARGVVLFPLDGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCC
SLTAWYLPPPPSAEPPRAVALFHGNAGSLIERVHKARMLAGEGLGVLMVEWRGYGGNPGR
EEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
PTEAGLLADGRAAIAFLEAQGIDRARQIFYGESLGSGVAFHLAAEGPAPAAVITEGAFTR
CCCCCEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHH
AVDVGARRYRWMPVRLLMRDRFDSLAAAQRVTCPVLILHGRQDGVVPFDMGPTLASAVAG
HHHHCHHHEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHC
KVSTFFPDQGGHVDLLDHGAQPVIAGFLREGAGGAFRLP
CHHEECCCCCCEEEHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GFVLCLLALPLALWLIACLALVIFQRALQYRPSLDPLPDPAAAGLAGARGVVLFPLDGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEECCC
SLTAWYLPPPPSAEPPRAVALFHGNAGSLIERVHKARMLAGEGLGVLMVEWRGYGGNPGR
EEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
PTEAGLLADGRAAIAFLEAQGIDRARQIFYGESLGSGVAFHLAAEGPAPAAVITEGAFTR
CCCCCEEECCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHH
AVDVGARRYRWMPVRLLMRDRFDSLAAAQRVTCPVLILHGRQDGVVPFDMGPTLASAVAG
HHHHCHHHEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHC
KVSTFFPDQGGHVDLLDHGAQPVIAGFLREGAGGAFRLP
CHHEECCCCCCEEEHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]