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The map label for this gene is 83593356

Identifier: 83593356

GI number: 83593356

Start: 2333738

End: 2334478

Strand: Reverse

Name: 83593356

Synonym: Rru_A2021

Alternate gene names: NA

Gene position: 2334478-2333738 (Counterclockwise)

Preceding gene: 83593359

Following gene: 83593355

Centisome position: 53.63

GC content: 60.59

Gene sequence:

>741_bases
GTGCGCAAAATCGGAGAAAAGACCCCGCCCCTGATCCGGGTGGTCTGTTGGAATATCCTGCATGGCGGTGGGCGGCGGGT
CGACGCCATTCTGACGCGGATCGTTCGTCATCGGCCTGATGTGCTTATTCTCACAGAGTTCCGTAACGATGCCTCGGGCC
AACGGCTGCGGGCCGGTTTGAGAGACATTGGTCTTTGGTATGAACACTTTGTTCCTACTCATAAGACCTCCAATGGCGTG
CTGATCGCCGCCCGGGACTATGTCGATGCGGTGCAGCCCCTCGATACCACGGTGCGAAAGCCCCATCTTTTGCTGGAAGG
GCTGGTTGCGGGACTCTCGGTTATTGGCGTGTACATGCCGATGGGCGAGGCCAAGACGCCTTACTGGGAGGCGGTCGTCG
CCGCCGCGCGGCGGCGCGAGGCCAGCCCGACGCTGGTCATCGGCGACTTCAACACCGGCAAGCACTTCATTGATGAGAAA
GGGACCTCTCTGGTTTCCGCCCCTTTCATGAACCGCATGGAAGAGGCCGGGTTCGTCGATCTCTGGCGTGCCCGAAATCC
CGAGGGCCGCGAGTTCACTTGGTTCAGCCACAAGGGAAACGGCTTCCGCCTTGACCACGCTTTCGCCTCGCCCTCGCTGG
CCGCAAGGGTCACCGACGTCTTCTATTCCCATGCCGAACGCCTCGACCGCATTTCCGACCACTCGGCCCTGATCTTGGAT
ATTCAGGCTTGGACCGAATGA

Upstream 100 bases:

>100_bases
GACTCTCCCCTTCCGTGGCGGTAGGGACCAGAATAAGGCCTATGAGGTAGACGAAGATCTCCTCTTGGGTGATGGTGACC
GCACGAGCGAAAGGATCTTC

Downstream 100 bases:

>100_bases
AAAGGGGTCTAAACCGGGTCTGACCCCTTTTTCTTTGACCCCTTTTTCTTTGCGGCCCAAGCCGATTGGTCGGCCCTTCA
GCGCGGGCAATTCTCGCTGC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Exonuclease III; Endonuclease/Exonuclease/Phosphatase

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRKIGEKTPPLIRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEHFVPTHKTSNGV
LIAARDYVDAVQPLDTTVRKPHLLLEGLVAGLSVIGVYMPMGEAKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEK
GTSLVSAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGFRLDHAFASPSLAARVTDVFYSHAERLDRISDHSALILD
IQAWTE

Sequences:

>Translated_246_residues
MRKIGEKTPPLIRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEHFVPTHKTSNGV
LIAARDYVDAVQPLDTTVRKPHLLLEGLVAGLSVIGVYMPMGEAKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEK
GTSLVSAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGFRLDHAFASPSLAARVTDVFYSHAERLDRISDHSALILD
IQAWTE
>Mature_246_residues
MRKIGEKTPPLIRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEHFVPTHKTSNGV
LIAARDYVDAVQPLDTTVRKPHLLLEGLVAGLSVIGVYMPMGEAKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEK
GTSLVSAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGFRLDHAFASPSLAARVTDVFYSHAERLDRISDHSALILD
IQAWTE

Specific function: Unknown

COG id: COG0708

COG function: function code L; Exonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.2

Molecular weight: Translated: 27706; Mature: 27706

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIGEKTPPLIRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGL
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
RDIGLWYEHFVPTHKTSNGVLIAARDYVDAVQPLDTTVRKPHLLLEGLVAGLSVIGVYMP
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
MGEAKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEKGTSLVSAPFMNRMEEAGFVD
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCEEHHHHHHHHHHCCCHH
LWRARNPEGREFTWFSHKGNGFRLDHAFASPSLAARVTDVFYSHAERLDRISDHSALILD
HHHCCCCCCCEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IQAWTE
EEECCC
>Mature Secondary Structure
MRKIGEKTPPLIRVVCWNILHGGGRRVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGL
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
RDIGLWYEHFVPTHKTSNGVLIAARDYVDAVQPLDTTVRKPHLLLEGLVAGLSVIGVYMP
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
MGEAKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEKGTSLVSAPFMNRMEEAGFVD
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCEEHHHHHHHHHHCCCHH
LWRARNPEGREFTWFSHKGNGFRLDHAFASPSLAARVTDVFYSHAERLDRISDHSALILD
HHHCCCCCCCEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
IQAWTE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA