| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593326
Identifier: 83593326
GI number: 83593326
Start: 2302097
End: 2302939
Strand: Reverse
Name: 83593326
Synonym: Rru_A1991
Alternate gene names: NA
Gene position: 2302939-2302097 (Counterclockwise)
Preceding gene: 83593327
Following gene: 83593325
Centisome position: 52.91
GC content: 65.36
Gene sequence:
>843_bases ATGGTCAAGGGGGACGGCGACGGGGAAACGGCGGAATCGGCTTTGGCGGCCTTGCCCGTGCCCCTGGGGCGGGCCTTCGC CGGCGCCCTGATCTTTTCCCTGCCGATGCTGATGACCATGGAAATGTGGTCGCTGGGCGCGTCGATGGATCCCTTTCGTC TGGCCCTGTTGCTGGGGGTCTCGGTGCCGCTGCTGATCGGGCTGGGGCGGATCGCCGGCTTCCGCGAAACCTCGTGCTGG AGCGATGACATCGCCGACGCCTTTGTCGCCATGGTGGTCGCCACGGTCACGGCGATCGCCATCCTGGCGGTTTTCGGCGC CCTGGGTCCGGGCATGTCGGCGCGCGAGATGATCGGCAAGGTCGCCCTGCAAGCGGTGCCGGGCAGCATCGGCGCCCTGT TGGCGCGCAGCCAGCTTGGTCAGGAAAGCCCCGAGGACGGCGAACCGCGATCGACCTATTTCGGCGAGGTGTTCCTGATG GCGGTCGGGGCGCTGTTTCTGTCGTTCAACATGGCGCCGACCGAGGAAATCATGTTGATTTCCTATGGCATGGGGGCTTG GCAGAAAATCGCCCTGATCCTCGCCTCGCTCGCCATCATGCATATCTTCGTTTATGAGGTCGGTTTTTCCGGTCAGGAGG CCCCCGGTTCCGAAACCGGCGGCTGGAGCCTGTTCGCCCGCTTTTCCGTGGTCGGCTATTGCGTGGTGCTGGCGGTCAGT TTGGCGGTGTTGTGGATTTTTGGCCGCACCGATGGCCTGGGGCTGGAACAACTGCTGGGGGCGACCATCGTTCTCGCCTT CCCCGGGGCCATCGGCGCCGCCGCCGCCCGCCTGATCTTGTGA
Upstream 100 bases:
>100_bases GCCCCCGCCCCGTCCACCCCTTGAGCTTTCGCCGCCTTCGGGAACCTTTTGCCCGGCTTTGGCGTCACCCTTGGCCAATC ACGGCGAGGGGGGCGCGGGC
Downstream 100 bases:
>100_bases GGGGAGAGGCGATGAGCCCGGCCAAGCGCCACGGCCGTCCCAAGGGCACCTCGATCCCCGAATGGATCCTGGCCGCTTTG GGGGGAACGCTGCTGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MVKGDGDGETAESALAALPVPLGRAFAGALIFSLPMLMTMEMWSLGASMDPFRLALLLGVSVPLLIGLGRIAGFRETSCW SDDIADAFVAMVVATVTAIAILAVFGALGPGMSAREMIGKVALQAVPGSIGALLARSQLGQESPEDGEPRSTYFGEVFLM AVGALFLSFNMAPTEEIMLISYGMGAWQKIALILASLAIMHIFVYEVGFSGQEAPGSETGGWSLFARFSVVGYCVVLAVS LAVLWIFGRTDGLGLEQLLGATIVLAFPGAIGAAAARLIL
Sequences:
>Translated_280_residues MVKGDGDGETAESALAALPVPLGRAFAGALIFSLPMLMTMEMWSLGASMDPFRLALLLGVSVPLLIGLGRIAGFRETSCW SDDIADAFVAMVVATVTAIAILAVFGALGPGMSAREMIGKVALQAVPGSIGALLARSQLGQESPEDGEPRSTYFGEVFLM AVGALFLSFNMAPTEEIMLISYGMGAWQKIALILASLAIMHIFVYEVGFSGQEAPGSETGGWSLFARFSVVGYCVVLAVS LAVLWIFGRTDGLGLEQLLGATIVLAFPGAIGAAAARLIL >Mature_280_residues MVKGDGDGETAESALAALPVPLGRAFAGALIFSLPMLMTMEMWSLGASMDPFRLALLLGVSVPLLIGLGRIAGFRETSCW SDDIADAFVAMVVATVTAIAILAVFGALGPGMSAREMIGKVALQAVPGSIGALLARSQLGQESPEDGEPRSTYFGEVFLM AVGALFLSFNMAPTEEIMLISYGMGAWQKIALILASLAIMHIFVYEVGFSGQEAPGSETGGWSLFARFSVVGYCVVLAVS LAVLWIFGRTDGLGLEQLLGATIVLAFPGAIGAAAARLIL
Specific function: Unknown
COG id: COG4711
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29114; Mature: 29114
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKGDGDGETAESALAALPVPLGRAFAGALIFSLPMLMTMEMWSLGASMDPFRLALLLGV CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SVPLLIGLGRIAGFRETSCWSDDIADAFVAMVVATVTAIAILAVFGALGPGMSAREMIGK HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VALQAVPGSIGALLARSQLGQESPEDGEPRSTYFGEVFLMAVGALFLSFNMAPTEEIMLI HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SYGMGAWQKIALILASLAIMHIFVYEVGFSGQEAPGSETGGWSLFARFSVVGYCVVLAVS ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LAVLWIFGRTDGLGLEQLLGATIVLAFPGAIGAAAARLIL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MVKGDGDGETAESALAALPVPLGRAFAGALIFSLPMLMTMEMWSLGASMDPFRLALLLGV CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SVPLLIGLGRIAGFRETSCWSDDIADAFVAMVVATVTAIAILAVFGALGPGMSAREMIGK HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VALQAVPGSIGALLARSQLGQESPEDGEPRSTYFGEVFLMAVGALFLSFNMAPTEEIMLI HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE SYGMGAWQKIALILASLAIMHIFVYEVGFSGQEAPGSETGGWSLFARFSVVGYCVVLAVS ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LAVLWIFGRTDGLGLEQLLGATIVLAFPGAIGAAAARLIL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA