| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is fruA [H]
Identifier: 83593305
GI number: 83593305
Start: 2277487
End: 2279214
Strand: Reverse
Name: fruA [H]
Synonym: Rru_A1970
Alternate gene names: 83593305
Gene position: 2279214-2277487 (Counterclockwise)
Preceding gene: 83593306
Following gene: 83593299
Centisome position: 52.36
GC content: 68.0
Gene sequence:
>1728_bases ATGAGCCAGTTTATCGCGGTCGTCGGCGGGGGCGAGCGGAGCACCCAGGCGCTGCTGGTCGCCGAGGCCCTGCGCCGGGC CGCCAGCGGGGCGGGGCACCGCATCGATATCGAGGTGCGCAGCGATCAGGGCGTGGTCAACGCCTTGAGCGACGACGCCA TCGTGCGCGCCAGGGCGGTGATCCTGATCGGCACCGGCGATCTGGATGTCGGGCGCTTTCCCGGGTTGCCCAAGCTTGAA ACCACCATCGAGGCGGTGCTGGCCGATGTGGGGGCGGTTCTCGGGCGGGCCGAGGGGGCCGAATTGGCCGGAAGCGTCGC CGCCACTGACGACGGGGTGCGGCGCATCGTCGCCATCACCTCCTGCCCGACCGGCATCGCCCATACCTTCATGGCCGCCG AGGGCATCACCCAGGCGGCCAAGGCTTTGGGCTATCAGGCCAGGGTCGAGACCCAGGGCTCGGTGGGATCGCGCGACACC TTAAGCGACGACGAGATCGCCCAGGCCGATATCGTGCTGATCGCCGCCGATACCCAGATCGATCTGGCGCGCTTCGACGG CAAGCGGGTGTTCCTGTCGGGCACCAAGCCGGCGATCGCCGATGGCAAGGCGCTGATCGCCCGCGCCCTGGCCGAGGCGA CGCTGCAAGGCGGCAAGAAATCCCTGGTCGATACGGTGGAGGCGGGCAAGGCCCAGCGCTCGGCCCAGCGCACGGGGGCC TATAAGCACCTGATGACCGGCGTGTCCTTCATGCTGCCCTTCGTCGTCGCCGGCGGGTTGCTGATCGCCCTGGCCTTCGC CTTGGGCGGCATCAACGCCTTTGACGAGGCCAATAAGGGAACGCTGGCCTATGACCTGTTCCAGATCGGCGCCAAAAGCG CCTTCGTGCTGATGGTTCCGGCCCTGGCCGGCTATATCGCCTTTTCCATCGCCGACCGGCCGGGCATCGCCCCGGGCATG ATCGGCGGTCTGGTCGCGGCCAATCTGGGGGCGGGTTTCCTGGGCGGCATCATCGCCGGCTTCATCGCCGGCTATGTCAC GGCTTGGTTCAATCGCACCATCCGGCTGCACCGCAATCTTGAAGGGTTGAAGCCGGTCCTGATCCTGCCCGTGCTGGGCA CCGTCGTGACCGGCTTGCTGATGATCTATGTCGTCGGCACGCCGGTGGCCGGGCTGTTGTCGTGGTTGACCGAGGCCTTG CGCGGCATGCAGGGCAGCAGCGCCATCGTGCTCGGGCTGTTGATCGGGGCGATGATGGCCTTCGATATGGGCGGCCCGGT CAATAAGGCGGCCTATGCCTTTTCCACCGGCCTGCTGGCCAGCGAGGTCTATACGCCGATGGCGGCGGCCATGGTGGCGG GGATGACCCCGGCCCTGGGCGTGGCCCTGGCCAGCCGGCTGTTTCGCAGCCGCTTCACCGCCAGCGAACGCGAGGCCGGC GGGGCGGCGGCGGTGCTGGGGCTGGCCTTCATCACCGAAGGCGCCATTCCCTTCGCTGCCTCCGATCCCTTCCGCGTCAT TCCGGCGCTGATGGCCGGATCGGCGGCGGCCGGGGCGATCTCGATGACGGTGGGAGCGGAGCTGAAAGTCCCCCACGGCG GCATTTTCGTGCTGCCGATCCCCAATGCCGTCACCCATTTGCTGGGCTATATCGTCGCCCTGGTCGTTGGCACCCTGATC ACCGCCCTGGTGCTGCGGATCACCAAACGCCCGGTGGCTGTTCTTTAG
Upstream 100 bases:
>100_bases CGCGACGTCGTTCTCGCCCTGGCCGGGCAAACCCATATCGCGCGTCTTCAAGCCTAACGCGTTGCCAACGCGGGCGCAGA CCCGCCGGGGAGGAGATATC
Downstream 100 bases:
>100_bases CAGGGGGCTTTGGCGCCCAGTCCAGGATGGCACTGCGCCAGGAAGAAGCGGAGCATTTCAGCGCTGGCGTCGGGCCCCCG GGGGTCGGTGAACGATCCCG
Product: PTS fructose IIC component
Products: NA
Alternate protein names: EIIBC-Fru; EII-Fru; Fructose-specific phosphotransferase enzyme IIB component; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MSQFIAVVGGGERSTQALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAVILIGTGDLDVGRFPGLPKLE TTIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIVAITSCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDT LSDDEIAQADIVLIAADTQIDLARFDGKRVFLSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGA YKHLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVPALAGYIAFSIADRPGIAPGM IGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNLEGLKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEAL RGMQGSSAIVLGLLIGAMMAFDMGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAG GAAAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPIPNAVTHLLGYIVALVVGTLI TALVLRITKRPVAVL
Sequences:
>Translated_575_residues MSQFIAVVGGGERSTQALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAVILIGTGDLDVGRFPGLPKLE TTIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIVAITSCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDT LSDDEIAQADIVLIAADTQIDLARFDGKRVFLSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGA YKHLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVPALAGYIAFSIADRPGIAPGM IGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNLEGLKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEAL RGMQGSSAIVLGLLIGAMMAFDMGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAG GAAAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPIPNAVTHLLGYIVALVVGTLI TALVLRITKRPVAVL >Mature_574_residues SQFIAVVGGGERSTQALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAVILIGTGDLDVGRFPGLPKLET TIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIVAITSCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDTL SDDEIAQADIVLIAADTQIDLARFDGKRVFLSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGAY KHLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVPALAGYIAFSIADRPGIAPGMI GGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNLEGLKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEALR GMQGSSAIVLGLLIGAMMAFDMGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAGG AAAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPIPNAVTHLLGYIVALVVGTLIT ALVLRITKRPVAVL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=462, Percent_Identity=53.2467532467532, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI1786951, Length=471, Percent_Identity=39.2781316348195, Blast_Score=277, Evalue=1e-75, Organism=Escherichia coli, GI1790386, Length=310, Percent_Identity=46.4516129032258, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI87082348, Length=435, Percent_Identity=36.551724137931, Blast_Score=234, Evalue=8e-63, Organism=Escherichia coli, GI1788729, Length=403, Percent_Identity=29.2803970223325, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790387, Length=95, Percent_Identity=40, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788730, Length=94, Percent_Identity=36.1702127659575, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58694; Mature: 58563
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFIAVVGGGERSTQALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAV CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCEEEEEEE ILIGTGDLDVGRFPGLPKLETTIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIVAIT EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHEEEEEEE SCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDTLSDDEIAQADIVLIAADTQI CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEE DLARFDGKRVFLSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGA EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YKHLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCCHHHHHHH ALAGYIAFSIADRPGIAPGMIGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNL HHHHHHHHEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGLKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEALRGMQGSSAIVLGLLIGAMMA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FDMGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCC GAAAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPI CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEECCCCCEEEEEC PNAVTHLLGYIVALVVGTLITALVLRITKRPVAVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQFIAVVGGGERSTQALLVAEALRRAASGAGHRIDIEVRSDQGVVNALSDDAIVRARAV CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCEEEEEEE ILIGTGDLDVGRFPGLPKLETTIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIVAIT EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHEEEEEEE SCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDTLSDDEIAQADIVLIAADTQI CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEE DLARFDGKRVFLSGTKPAIADGKALIARALAEATLQGGKKSLVDTVEAGKAQRSAQRTGA EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YKHLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCCHHHHHHH ALAGYIAFSIADRPGIAPGMIGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNL HHHHHHHHEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGLKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEALRGMQGSSAIVLGLLIGAMMA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FDMGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAG HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCC GAAAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPI CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEECCCCCEEEEEC PNAVTHLLGYIVALVVGTLITALVLRITKRPVAVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1655739; 12024217; 1650911 [H]