| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593261
Identifier: 83593261
GI number: 83593261
Start: 2230898
End: 2231557
Strand: Direct
Name: 83593261
Synonym: Rru_A1926
Alternate gene names: NA
Gene position: 2230898-2231557 (Clockwise)
Preceding gene: 83593259
Following gene: 83593263
Centisome position: 51.25
GC content: 69.39
Gene sequence:
>660_bases ATGACCGATCCCTCGCCGCGCGTTCAGCTTCGTCGCCATCCCGAGCGCGGCAGCCACCAGCGCGAGGCCATCCTCGCCGT GCTTGATGGCGCCTTCGTCTGCCATCTGGCCTTCGCCACCGAGAGCGGCCCGGCCTGCGTACCGACCTGCTATGGCCGCA TCGATGATGTTTTGTATATCCACGGCGCCCCGGCCTCGCGGCTGATGGCCGGCGGACGCCAGGGCGGCCTGGCGGTTTGT CTAACCGTTACCCAGATCGACGGCGTGGTCATGGCGCGCAGCGCCTTCCACCATTCCTTGAATTTCCGCAGCGTCATGGT TTTGGGAACGGCGCAAGCGGTCAGCGACCCGGAGGAAAAGACCCGGGGGCTGGCGGCGATCACCGATCAGGTGGCGCCCG GTCGCTGGGATGAATGCCGGCCGATGACCGAGGCGGAACTGAAGGCGACGGCGGTGCTGCGCCTGGATCTGGCCGAAGCC TCGTTGAAGGAACGCCAGGGTCCGCCAAGCGACCCGGCGTCCGATGCCGGGCTGCCGATCTGGACCGGGGTGGTTCCTGT GGCGCTCAGCGCCGGCGCCCCGCTGGCCGCCGAGGAGAACGCCACCGCCGCTTTGCCGGACTCGGTCAAGCGCCTGCGCG CCCGCCATCCCGCCCCCTGA
Upstream 100 bases:
>100_bases GGACCCATCACTTTGTCATAGGCTGGATCTTTTCGCGACCACCTGGATAGGGCACATCCCTGGAGCAGACAGCAGCTTTC CCCCCAGGAGGACCTTGACG
Downstream 100 bases:
>100_bases TAATTCCGGCGGGGCCCCCCATGCCGGAAGGCCCCGCCGACAAGGCGTTTGTCAGTCGGCGGCCACGGCTTCGCGCATCG AACCGGTCTTGGCCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTDPSPRVQLRRHPERGSHQREAILAVLDGAFVCHLAFATESGPACVPTCYGRIDDVLYIHGAPASRLMAGGRQGGLAVC LTVTQIDGVVMARSAFHHSLNFRSVMVLGTAQAVSDPEEKTRGLAAITDQVAPGRWDECRPMTEAELKATAVLRLDLAEA SLKERQGPPSDPASDAGLPIWTGVVPVALSAGAPLAAEENATAALPDSVKRLRARHPAP
Sequences:
>Translated_219_residues MTDPSPRVQLRRHPERGSHQREAILAVLDGAFVCHLAFATESGPACVPTCYGRIDDVLYIHGAPASRLMAGGRQGGLAVC LTVTQIDGVVMARSAFHHSLNFRSVMVLGTAQAVSDPEEKTRGLAAITDQVAPGRWDECRPMTEAELKATAVLRLDLAEA SLKERQGPPSDPASDAGLPIWTGVVPVALSAGAPLAAEENATAALPDSVKRLRARHPAP >Mature_218_residues TDPSPRVQLRRHPERGSHQREAILAVLDGAFVCHLAFATESGPACVPTCYGRIDDVLYIHGAPASRLMAGGRQGGLAVCL TVTQIDGVVMARSAFHHSLNFRSVMVLGTAQAVSDPEEKTRGLAAITDQVAPGRWDECRPMTEAELKATAVLRLDLAEAS LKERQGPPSDPASDAGLPIWTGVVPVALSAGAPLAAEENATAALPDSVKRLRARHPAP
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23137; Mature: 23005
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPSPRVQLRRHPERGSHQREAILAVLDGAFVCHLAFATESGPACVPTCYGRIDDVLYI CCCCCCCHHEEECCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHCCCCCEEEE HGAPASRLMAGGRQGGLAVCLTVTQIDGVVMARSAFHHSLNFRSVMVLGTAQAVSDPEEK ECCCHHHHHHCCCCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCEEEEEECHHHHCCHHHH TRGLAAITDQVAPGRWDECRPMTEAELKATAVLRLDLAEASLKERQGPPSDPASDAGLPI HCCHHHHHHCCCCCCCHHCCCCCHHHHHEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCH WTGVVPVALSAGAPLAAEENATAALPDSVKRLRARHPAP HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TDPSPRVQLRRHPERGSHQREAILAVLDGAFVCHLAFATESGPACVPTCYGRIDDVLYI CCCCCCHHEEECCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHCCCCCEEEE HGAPASRLMAGGRQGGLAVCLTVTQIDGVVMARSAFHHSLNFRSVMVLGTAQAVSDPEEK ECCCHHHHHHCCCCCCEEEEEEEEHHCCHHHHHHHHHHCCCCCEEEEEECHHHHCCHHHH TRGLAAITDQVAPGRWDECRPMTEAELKATAVLRLDLAEASLKERQGPPSDPASDAGLPI HCCHHHHHHCCCCCCCHHCCCCCHHHHHEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCH WTGVVPVALSAGAPLAAEENATAALPDSVKRLRARHPAP HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA