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The map label for this gene is yvdB [H]

Identifier: 83593241

GI number: 83593241

Start: 2209723

End: 2211411

Strand: Direct

Name: yvdB [H]

Synonym: Rru_A1906

Alternate gene names: 83593241

Gene position: 2209723-2211411 (Clockwise)

Preceding gene: 83593235

Following gene: 83593242

Centisome position: 50.77

GC content: 67.26

Gene sequence:

>1689_bases
ATGTCAGCTCTTATCAACGGCTTGCGGTTTGACACTTTGCGCGGCGACCTTTTCGGCGGCATCACCGCCGCCGTGGTGGC
CCTGCCCCTCGCGCTCGCCTTTGGCGTCGCCTCGGGAGCCGGGGCGATCGCCGGCCTCTATGGCGCGATTTTCGTCGGCT
TCTTCGCCGCCCTGTTCGGCGGCACCCCGGCCCAGGTTTCCGGCCCCACCGGCCCAATGACGGTGGTGATGACCGGCGTC
GTCATGCAGTTCGCCCATGATCCCGCCCTCGCCTTCACCGTGGTGATGATGGGCGGGCTGGTGCAAATGATATTTGGCGC
CCTCGGCCTCGGCCGCTATGTCACCTATGTTCCGACCCCGGTGGTTTCGGGATTCATGAGCGGCATCGGCGCCATCATCA
TCATCCTTGAAATCGCCCCGCTGCTCGGCGTCGCCGGCGGCCAGGAGGGCGTGTTGGCGACGCTGGCCGCCCTGCCCCGG
GTTATCGCCGCCACCAACCCGGCGGCGGCCGGCCTGGGCGCCCTCACCCTGGCCCTGGTCGTTTTGTGGCCCAAGGCCTG
GGGCAAGATCGTGCCCGCCGCCCTGGTCGCCCTGGTCGTCGGCACCCTGATCGCCCGCTTCGCCCTGCCCGGGGTGCCGG
TGATCGGCGCCATTCCCACGGGCTTTCCCCAGCCCCATCTGCCCAGCATCGATCTTGGCGTCTTGCCCAGCATGATCGCC
AGCGCCCTGATGCTGGGATTGCTTGGCTGCATCGACAGCCTTCTGACCTCGCTGGTCGCCGACACCCTGACCCGCGTTCC
CCATAAATCCGACCGCGAATTGCTGGGCCAAGGCCTGGGCAATGTGATCGCCGGGCTGTTTGGCGGCATTCCCGGGGCGG
GGGCGACGATGCGCACGGTGATCAACATCCGCGCCGGCGGCCGGACGCCCCTGTCGGGGGCCCTGCACGCCCTGGTGCTG
CTCGCCCTGGTGCTGGGGCTCGCCCCTTTGGCCGAAGGCGTGCCCCATGCCGTTCTGGCGGGGATCTTGCTCAAGGTGGG
CTGGGACATCATCGACTGGCCCTATCTGCGGCGCTTGCGCCAGGCGCCGCGCGATGGGGTGGTGACCATGGTGGTGGTTC
TGGTGCTGACGGTGGCCGTTGATCTGATCACCGCCGTCGCCGTCGGCATCATCGTCAAAAGCCTGCTCGCCGCCCGGGCG
ATGGCGCCTTATCAGCTTGACCGCATCCGGGTGGTTTCCGGCGACGGCGGCGGACTGGCGCTTGGCCAAAGCGAGCAGGC
CCTGCTCGCCCGCGCCGGATCGGCGATCGCCCTGGTCCATCTGTCGGGCCCCTTCAGCTTCTGCTCGGCCAACGACATGA
TCCGCCGGTCGCTGCGGCTGGGTGGAACGCAGGTGGTGGTCTTCGATCTGACAGAGGTGCCGATGATCGATACCTCGGTG
GCGCTGGCCCTGGGCCAGATGATCGGCGAGGTTGGCGAAAGCGGGGCGCGGGTGGTGATCGCCGGCATGGGGGGACCGGG
AATCGAAACCCTGGCGACGCTCGGCGTTCTTGACCGCTTCACCCCGGCCGATCTGGTTGAGACAAGACGAACGGCCCTGG
AACGCGCGCTGTCTTTGGTTGAAGAAAAGAACACCCCTGGAAACCCTGACGGCGAAAACCCAAATTGTCAGAAAACCAGG
GAGAAATAA

Upstream 100 bases:

>100_bases
CCCCGCCTGGACGGCGGCCGGGGAAGGCTTTGATCGACGCGGGGCCCGTGCTACATCGGGACGAGGCCCTCCCCCTCCGT
CTCGAAACAGGCCCGATTAT

Downstream 100 bases:

>100_bases
CAAATGTCCTCAAATCCAAACCAGAGATCAGCCCCCGCCGACTTTCCACCGCCCGCGGCCAAGTCCGACAAGGATTGGCG
CGCCATCCTGACCGAGGATC

Product: sulfate transporter/antisigma-factor antagonist

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSALINGLRFDTLRGDLFGGITAAVVALPLALAFGVASGAGAIAGLYGAIFVGFFAALFGGTPAQVSGPTGPMTVVMTGV
VMQFAHDPALAFTVVMMGGLVQMIFGALGLGRYVTYVPTPVVSGFMSGIGAIIIILEIAPLLGVAGGQEGVLATLAALPR
VIAATNPAAAGLGALTLALVVLWPKAWGKIVPAALVALVVGTLIARFALPGVPVIGAIPTGFPQPHLPSIDLGVLPSMIA
SALMLGLLGCIDSLLTSLVADTLTRVPHKSDRELLGQGLGNVIAGLFGGIPGAGATMRTVINIRAGGRTPLSGALHALVL
LALVLGLAPLAEGVPHAVLAGILLKVGWDIIDWPYLRRLRQAPRDGVVTMVVVLVLTVAVDLITAVAVGIIVKSLLAARA
MAPYQLDRIRVVSGDGGGLALGQSEQALLARAGSAIALVHLSGPFSFCSANDMIRRSLRLGGTQVVVFDLTEVPMIDTSV
ALALGQMIGEVGESGARVVIAGMGGPGIETLATLGVLDRFTPADLVETRRTALERALSLVEEKNTPGNPDGENPNCQKTR
EK

Sequences:

>Translated_562_residues
MSALINGLRFDTLRGDLFGGITAAVVALPLALAFGVASGAGAIAGLYGAIFVGFFAALFGGTPAQVSGPTGPMTVVMTGV
VMQFAHDPALAFTVVMMGGLVQMIFGALGLGRYVTYVPTPVVSGFMSGIGAIIIILEIAPLLGVAGGQEGVLATLAALPR
VIAATNPAAAGLGALTLALVVLWPKAWGKIVPAALVALVVGTLIARFALPGVPVIGAIPTGFPQPHLPSIDLGVLPSMIA
SALMLGLLGCIDSLLTSLVADTLTRVPHKSDRELLGQGLGNVIAGLFGGIPGAGATMRTVINIRAGGRTPLSGALHALVL
LALVLGLAPLAEGVPHAVLAGILLKVGWDIIDWPYLRRLRQAPRDGVVTMVVVLVLTVAVDLITAVAVGIIVKSLLAARA
MAPYQLDRIRVVSGDGGGLALGQSEQALLARAGSAIALVHLSGPFSFCSANDMIRRSLRLGGTQVVVFDLTEVPMIDTSV
ALALGQMIGEVGESGARVVIAGMGGPGIETLATLGVLDRFTPADLVETRRTALERALSLVEEKNTPGNPDGENPNCQKTR
EK
>Mature_561_residues
SALINGLRFDTLRGDLFGGITAAVVALPLALAFGVASGAGAIAGLYGAIFVGFFAALFGGTPAQVSGPTGPMTVVMTGVV
MQFAHDPALAFTVVMMGGLVQMIFGALGLGRYVTYVPTPVVSGFMSGIGAIIIILEIAPLLGVAGGQEGVLATLAALPRV
IAATNPAAAGLGALTLALVVLWPKAWGKIVPAALVALVVGTLIARFALPGVPVIGAIPTGFPQPHLPSIDLGVLPSMIAS
ALMLGLLGCIDSLLTSLVADTLTRVPHKSDRELLGQGLGNVIAGLFGGIPGAGATMRTVINIRAGGRTPLSGALHALVLL
ALVLGLAPLAEGVPHAVLAGILLKVGWDIIDWPYLRRLRQAPRDGVVTMVVVLVLTVAVDLITAVAVGIIVKSLLAARAM
APYQLDRIRVVSGDGGGLALGQSEQALLARAGSAIALVHLSGPFSFCSANDMIRRSLRLGGTQVVVFDLTEVPMIDTSVA
LALGQMIGEVGESGARVVIAGMGGPGIETLATLGVLDRFTPADLVETRRTALERALSLVEEKNTPGNPDGENPNCQKTRE
K

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827800, Length=422, Percent_Identity=25.8293838862559, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI39752683, Length=422, Percent_Identity=25.8293838862559, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI45827802, Length=422, Percent_Identity=25.8293838862559, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI4505697, Length=411, Percent_Identity=23.1143552311436, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI16306483, Length=400, Percent_Identity=25.25, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI20336282, Length=400, Percent_Identity=25.25, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI94721259, Length=420, Percent_Identity=25.2380952380952, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI94721257, Length=420, Percent_Identity=25.2380952380952, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI94721255, Length=420, Percent_Identity=25.2380952380952, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI94721253, Length=420, Percent_Identity=25.2380952380952, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI269784651, Length=404, Percent_Identity=24.2574257425743, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI65506789, Length=263, Percent_Identity=29.277566539924, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4557535, Length=390, Percent_Identity=22.8205128205128, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI47131207, Length=457, Percent_Identity=24.0700218818381, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI20336272, Length=457, Percent_Identity=24.0700218818381, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI100913030, Length=440, Percent_Identity=23.6363636363636, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI87081859, Length=530, Percent_Identity=30.188679245283, Blast_Score=184, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI86565215, Length=370, Percent_Identity=25.9459459459459, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17551690, Length=426, Percent_Identity=21.3615023474178, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86564196, Length=431, Percent_Identity=23.4338747099768, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562578, Length=429, Percent_Identity=24.2424242424242, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86565211, Length=231, Percent_Identity=26.4069264069264, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI86565209, Length=229, Percent_Identity=26.6375545851528, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17566848, Length=430, Percent_Identity=21.8604651162791, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=555, Percent_Identity=21.2612612612613, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85815873, Length=517, Percent_Identity=25.1450676982592, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19922482, Length=518, Percent_Identity=22.972972972973, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24649801, Length=433, Percent_Identity=26.3279445727483, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24666186, Length=272, Percent_Identity=24.2647058823529, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647160, Length=133, Percent_Identity=35.3383458646617, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355087, Length=133, Percent_Identity=35.3383458646617, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 57230; Mature: 57099

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SALINGLRFDTLRGDLFGGITAAVVALPLALAFGVASGAGAIAGLYGAIFVGFFAALFG
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC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HHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]