Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 83593239

GI number: 83593239

Start: 2206654

End: 2207748

Strand: Reverse

Name: yufP [H]

Synonym: Rru_A1904

Alternate gene names: 83593239

Gene position: 2207748-2206654 (Counterclockwise)

Preceding gene: 83593240

Following gene: 83593238

Centisome position: 50.72

GC content: 67.4

Gene sequence:

>1095_bases
ATGAGCCGGTCTTCCCGTTTCATCACCCTGGAAGCCCGCCCCGAACCCTCGGCGCTGTGGGTTTGGGCGGCGCCCCTGCT
GGCCGTCGGCCTGACCCTGATCGCCGGCGGCCTGTTGTTCGCCGCCCTCGGCAAGGATCCCGTCGCCGCCCTGGCCGGGT
TTTTCCTCAAGCCCTTGTCCAGCCTCTATGGCCTGGGCGAGCTTGGCGTGAAGGCGGCGCCGCTGGCGCTGATCGCCGCC
GGTCTGGCGGTGGGCTTTCGCGGCGGCGTCTGGAACATCGGCGCCGAAGGTCAATTGACCATGGGGGCGGTGGTCGGCGG
CGGCGTCGGGCTGGCCTTTCTCGAATCGACCGGGCCGCTGGTCCTGCCGGCGATGATGCTCTGCGGCGCTTTGGGCGGCA
TGGCCTGGGCGGCGATCCCGGCGCTGCTGCGCACCCGCTTCAACGCCAATGAGATCCTGACCAGCCTGATGCTGACCTAT
GTCGCCCAGTTGTTGCTGAGCTGGCTGGTCCATGGACCCTGGCGCAGCCCCTCGGGCTTCAATTTTCCCGAAACCGAGAT
GTTCGGCCCGGCCGCCACCTTGCCGGTGCTGATCGAGGGAACCCGCCTGCATCTCGGCGTCGTGCTGGCCCTGGTCGTCG
TCGGCGCCATCTGGGTGCTGCTGGGGCGCAGTTTCATCGGCTTTCAGATCAAGGTCATGGGATTGGCGCCGCGCGCCGGC
GCCTATGCCGGCTTCAGCCAGCGCCGGGTGATCTGGATGGCGATGCTGCTTTCGGGCGGCGCCGCCGGTCTGGCCGGATT
GTTCGAGGTCGCCGGGCCGATCGGCCAGCTTCAGCCGGCGATTTCGCCCGGGTACGGCTTCACCGCGATCATCGTCGCCT
TTTTGGGCCGGCTCCATCCGCTGGGCATCGTTTTCGCCGCCTGCTTCATGGCATTGACCTATCTGGGCGGCGAGACCGTG
CAGATGGATATGGGGCTGCCCTTGGCGGTGACCGGGGTTTTCCAGGGCATGATCTTGTTCTTCCTGCTGGCCGCCGATGT
GTTGATCCGCTACCGGATCCGCCTCGGTCGGGCTGCTTCCGCAAAGGCTTTGTGA

Upstream 100 bases:

>100_bases
CGGAGGCCCGCCCCTCGCATGAGGCGACGCTGGAACAGGTCGGCCTGATGATGGGCGGCTTGTTCGATCTCCAGGGCGAC
GCGGTGGCGGAGACGGTGCG

Downstream 100 bases:

>100_bases
GATGGATGTCGAGACCCTGGGCGCCATTGGCGGCGCCATGAGCCGCGCCGCCACCCCCCTGGCCCTGGCCGCCGTCGGCG
AGCTGGTGACCGAGAAGGCC

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSRSSRFITLEARPEPSALWVWAAPLLAVGLTLIAGGLLFAALGKDPVAALAGFFLKPLSSLYGLGELGVKAAPLALIAA
GLAVGFRGGVWNIGAEGQLTMGAVVGGGVGLAFLESTGPLVLPAMMLCGALGGMAWAAIPALLRTRFNANEILTSLMLTY
VAQLLLSWLVHGPWRSPSGFNFPETEMFGPAATLPVLIEGTRLHLGVVLALVVVGAIWVLLGRSFIGFQIKVMGLAPRAG
AYAGFSQRRVIWMAMLLSGGAAGLAGLFEVAGPIGQLQPAISPGYGFTAIIVAFLGRLHPLGIVFAACFMALTYLGGETV
QMDMGLPLAVTGVFQGMILFFLLAADVLIRYRIRLGRAASAKAL

Sequences:

>Translated_364_residues
MSRSSRFITLEARPEPSALWVWAAPLLAVGLTLIAGGLLFAALGKDPVAALAGFFLKPLSSLYGLGELGVKAAPLALIAA
GLAVGFRGGVWNIGAEGQLTMGAVVGGGVGLAFLESTGPLVLPAMMLCGALGGMAWAAIPALLRTRFNANEILTSLMLTY
VAQLLLSWLVHGPWRSPSGFNFPETEMFGPAATLPVLIEGTRLHLGVVLALVVVGAIWVLLGRSFIGFQIKVMGLAPRAG
AYAGFSQRRVIWMAMLLSGGAAGLAGLFEVAGPIGQLQPAISPGYGFTAIIVAFLGRLHPLGIVFAACFMALTYLGGETV
QMDMGLPLAVTGVFQGMILFFLLAADVLIRYRIRLGRAASAKAL
>Mature_363_residues
SRSSRFITLEARPEPSALWVWAAPLLAVGLTLIAGGLLFAALGKDPVAALAGFFLKPLSSLYGLGELGVKAAPLALIAAG
LAVGFRGGVWNIGAEGQLTMGAVVGGGVGLAFLESTGPLVLPAMMLCGALGGMAWAAIPALLRTRFNANEILTSLMLTYV
AQLLLSWLVHGPWRSPSGFNFPETEMFGPAATLPVLIEGTRLHLGVVLALVVVGAIWVLLGRSFIGFQIKVMGLAPRAGA
YAGFSQRRVIWMAMLLSGGAAGLAGLFEVAGPIGQLQPAISPGYGFTAIIVAFLGRLHPLGIVFAACFMALTYLGGETVQ
MDMGLPLAVTGVFQGMILFFLLAADVLIRYRIRLGRAASAKAL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37846; Mature: 37715

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSSRFITLEARPEPSALWVWAAPLLAVGLTLIAGGLLFAALGKDPVAALAGFFLKPLS
CCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLYGLGELGVKAAPLALIAAGLAVGFRGGVWNIGAEGQLTMGAVVGGGVGLAFLESTGPL
HHHCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHCCCHHHEEECCCCCH
VLPAMMLCGALGGMAWAAIPALLRTRFNANEILTSLMLTYVAQLLLSWLVHGPWRSPSGF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NFPETEMFGPAATLPVLIEGTRLHLGVVLALVVVGAIWVLLGRSFIGFQIKVMGLAPRAG
CCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEEECCCCC
AYAGFSQRRVIWMAMLLSGGAAGLAGLFEVAGPIGQLQPAISPGYGFTAIIVAFLGRLHP
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
LGIVFAACFMALTYLGGETVQMDMGLPLAVTGVFQGMILFFLLAADVLIRYRIRLGRAAS
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AKAL
CCCC
>Mature Secondary Structure 
SRSSRFITLEARPEPSALWVWAAPLLAVGLTLIAGGLLFAALGKDPVAALAGFFLKPLS
CCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SLYGLGELGVKAAPLALIAAGLAVGFRGGVWNIGAEGQLTMGAVVGGGVGLAFLESTGPL
HHHCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHCCCHHHEEECCCCCH
VLPAMMLCGALGGMAWAAIPALLRTRFNANEILTSLMLTYVAQLLLSWLVHGPWRSPSGF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NFPETEMFGPAATLPVLIEGTRLHLGVVLALVVVGAIWVLLGRSFIGFQIKVMGLAPRAG
CCCCHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEEECCCCC
AYAGFSQRRVIWMAMLLSGGAAGLAGLFEVAGPIGQLQPAISPGYGFTAIIVAFLGRLHP
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
LGIVFAACFMALTYLGGETVQMDMGLPLAVTGVFQGMILFFLLAADVLIRYRIRLGRAAS
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AKAL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]