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The map label for this gene is recO

Identifier: 83593184

GI number: 83593184

Start: 2148828

End: 2149586

Strand: Reverse

Name: recO

Synonym: Rru_A1849

Alternate gene names: 83593184

Gene position: 2149586-2148828 (Counterclockwise)

Preceding gene: 83593185

Following gene: 83593183

Centisome position: 49.38

GC content: 72.46

Gene sequence:

>759_bases
GTGATCGAATGGAGCGATCGGGGAATCGTGCTGGCCGCCCGGCCCCATGGCGAGGATGGGGTGATCGTCAGCCTGCTGAG
CGCCGGCCATGGGCGCCATTCCGGCATCGTCCGCGGCGGACGCGGCAAGCGGCTGCGCGCCGCCCTTCAGCCGGGATCCC
TGGTTCAGGCCACGTGGAAGGCCCGCCTGGAAGATCATCTGGGCAGCCTTGTCGTCGAGCTTCTGGCCGGGGTGGCCGGG
GGATTGCTGGATGATCGCGACCGGCTGGCCGCCCTGGCGGCGGCCTGTGCCCTGGCCGAAACGGTCTTGCCCGAACGCGC
CCCCCAGGCCGATGTCTATGACGCGACCCTGGCGCTGCTCGACGCCCTGGCCGAGGGCGGGGAGGGCACCCCCCTGGTCT
GGGCGGGGGCCTTCGTGCGCTGGGAAATCGGGCTGCTCGCCGCTTTGGGCTTCGGGCTTGACCTGTCATGCTGCGCCGTG
AGCGGGGAGTGCGGCGATCTCGCCTATGTCTCGCCGCGCAGCGGCCGGGCGGTCGGGCGGGAGGCGGGCGCGCCGTGGCA
GGCGCGGCTGCTTGCCCTGCCGGCCTTTCTGCTGTCGCCCGCCGAGGTTCCGGCGAACGCCCAGGCGGTTGGTGACGGCC
TGCGCCTTAGCGGCTATTTCCTGGAGGGGCATGTTCTGGCGCCCCAGGGGCGGGGATTGCCCGCCAGCCGGCAGAGGTTT
GTCGAACGGTTGCGCCGGTGGTCAGCGGCGGACCGGTGA

Upstream 100 bases:

>100_bases
TGCCGCGCTGGCTGGTGGCGCTCCTGGTCTTTTGCGGCATCCTCTGCCTGATGGCCGGGGTGGCGGTGCTGCTGGTCTAG
CTGGAAAAGGTCGCCGTCGG

Downstream 100 bases:

>100_bases
TGTCTATGGTGCGTTGAGAAAGAGGATCCGATCCCGATGAGCAAAGGCCCCGTTCCCGAACCCCTGGAGATCCGCGAAAC
GCCGCTGAGCGAAGCGCTCT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWKARLEDHLGSLVVELLAGVAG
GLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALLDALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAV
SGECGDLAYVSPRSGRAVGREAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
VERLRRWSAADR

Sequences:

>Translated_252_residues
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWKARLEDHLGSLVVELLAGVAG
GLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALLDALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAV
SGECGDLAYVSPRSGRAVGREAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
VERLRRWSAADR
>Mature_252_residues
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWKARLEDHLGSLVVELLAGVAG
GLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALLDALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAV
SGECGDLAYVSPRSGRAVGREAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
VERLRRWSAADR

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_RHORT (Q2RT96)

Other databases:

- EMBL:   CP000230
- RefSeq:   YP_426936.1
- ProteinModelPortal:   Q2RT96
- SMR:   Q2RT96
- STRING:   Q2RT96
- GeneID:   3835273
- GenomeReviews:   CP000230_GR
- KEGG:   rru:Rru_A1849
- NMPDR:   fig|1085.1.peg.2423
- eggNOG:   COG1381
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- BioCyc:   RRUB269796:RRU_A1849-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26372; Mature: 26372

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWK
CCEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHH
ARLEDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGR
HHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCC
EAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEECEEECCCCCCCCHHHHHH
VERLRRWSAADR
HHHHHHHCCCCC
>Mature Secondary Structure
MIEWSDRGIVLAARPHGEDGVIVSLLSAGHGRHSGIVRGGRGKRLRAALQPGSLVQATWK
CCEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCEEEEECCCCHHHHHHHH
ARLEDHLGSLVVELLAGVAGGLLDDRDRLAALAAACALAETVLPERAPQADVYDATLALL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DALAEGGEGTPLVWAGAFVRWEIGLLAALGFGLDLSCCAVSGECGDLAYVSPRSGRAVGR
HHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCCC
EAGAPWQARLLALPAFLLSPAEVPANAQAVGDGLRLSGYFLEGHVLAPQGRGLPASRQRF
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEECEEECCCCCCCCHHHHHH
VERLRRWSAADR
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA