| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593182
Identifier: 83593182
GI number: 83593182
Start: 2145652
End: 2146554
Strand: Direct
Name: 83593182
Synonym: Rru_A1847
Alternate gene names: NA
Gene position: 2145652-2146554 (Clockwise)
Preceding gene: 83593181
Following gene: 83593194
Centisome position: 49.29
GC content: 65.34
Gene sequence:
>903_bases ATGACGCGCATCGCCCTTACCCACGTCACCACCTACCGCTACGGCGCGCCGGTCACGCTTGGCGAACACAAGATGATGTT CCGCCCGCGCGATAGCCACGACCTGCATATCGTCGAGGCCACGCTGGTCTTGAGCCCGGTCGCCGAGGTGCGCTGGATGC ACGACGTGTTTGGCAATTCGATCACCATCGCCGACTTCCAAGGCGCCAGCACCGATTTTCTGCGCTTCGAGAGCAAGATC CTGCTCGACCACTTCGGCCTGTCCGAACCAACCTATCCGATCGCCGCTTACGCCGAGACCTTCCCCTTCACCTATGACGC CGATCTGGTCGCCGATCTCGGGCGAACCAACGAGCGCCATTATCCCGATCCCGACCACCGGCTTGACGCCTGGGCCCGGC GCTTCCTTGACGAACCGGGGGAAACCGCCACCCTGGAGATGCTGAGCGCGATGAACCGGGCGATTTCGGCCGAGTTCAGC TATGCCGCCCGCGATACCGAAGGCACCCAGACGCCGCTGGAAACCCTGGAGCGCGGCAGCGGCAGTTGTCGCGACTTCGC CTTGCTGATGATGGAGGCGGTGCGCTCGCTGGGGTTGGCCGCCCGCTTCGTCAGCGGCTATCTGTATGATCCGGCCCTTG ACGGCCGGAACGCCAGCGGCACCGTCGGCGCGGGCGCCACCCACGCGTGGCTTCAGGTCTATCTGCCCGGCGCCGGCTGG GTGGAATTCGATCCGACCAACGCCCTGGTCGGCGGCGAAAACCTCATCCGGGTGGCCGTCACCCGCGATCCCTCGCAAGC CGTGCCGATCACCGGCAGCTTCGCCGGTCCGGGCAACGCCTTCTTGTCGATGGAGGTCGAAGTGACCCTCCACCGCCAGG ACCAGAACATTCAAGTCGCCTAA
Upstream 100 bases:
>100_bases AAGGGCTAATTCGCCGCCATCCGGGCGTTGGGCGGATCGACTGGCAGGCCCGGACGTTGGATCGGTCCCGAAGCGGTTTT CCAAAGGGATGGCCCCCATC
Downstream 100 bases:
>100_bases ACACCTTATGGCCCGAAGCTGTTGGTGCGCGGGAAGCCCTGGGGCGGCAGTCGTCCCAGGCCGGCCCGGTCGCCCAACCA GGCGGTCAGGTCGCTTTCGG
Product: transglutaminase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTRIALTHVTTYRYGAPVTLGEHKMMFRPRDSHDLHIVEATLVLSPVAEVRWMHDVFGNSITIADFQGASTDFLRFESKI LLDHFGLSEPTYPIAAYAETFPFTYDADLVADLGRTNERHYPDPDHRLDAWARRFLDEPGETATLEMLSAMNRAISAEFS YAARDTEGTQTPLETLERGSGSCRDFALLMMEAVRSLGLAARFVSGYLYDPALDGRNASGTVGAGATHAWLQVYLPGAGW VEFDPTNALVGGENLIRVAVTRDPSQAVPITGSFAGPGNAFLSMEVEVTLHRQDQNIQVA
Sequences:
>Translated_300_residues MTRIALTHVTTYRYGAPVTLGEHKMMFRPRDSHDLHIVEATLVLSPVAEVRWMHDVFGNSITIADFQGASTDFLRFESKI LLDHFGLSEPTYPIAAYAETFPFTYDADLVADLGRTNERHYPDPDHRLDAWARRFLDEPGETATLEMLSAMNRAISAEFS YAARDTEGTQTPLETLERGSGSCRDFALLMMEAVRSLGLAARFVSGYLYDPALDGRNASGTVGAGATHAWLQVYLPGAGW VEFDPTNALVGGENLIRVAVTRDPSQAVPITGSFAGPGNAFLSMEVEVTLHRQDQNIQVA >Mature_299_residues TRIALTHVTTYRYGAPVTLGEHKMMFRPRDSHDLHIVEATLVLSPVAEVRWMHDVFGNSITIADFQGASTDFLRFESKIL LDHFGLSEPTYPIAAYAETFPFTYDADLVADLGRTNERHYPDPDHRLDAWARRFLDEPGETATLEMLSAMNRAISAEFSY AARDTEGTQTPLETLERGSGSCRDFALLMMEAVRSLGLAARFVSGYLYDPALDGRNASGTVGAGATHAWLQVYLPGAGWV EFDPTNALVGGENLIRVAVTRDPSQAVPITGSFAGPGNAFLSMEVEVTLHRQDQNIQVA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 33015; Mature: 32884
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIALTHVTTYRYGAPVTLGEHKMMFRPRDSHDLHIVEATLVLSPVAEVRWMHDVFGNS CCEEEEEEEEEEECCCCEEECCCEEEECCCCCCCEEEEEEEHHHCCHHHHHHHHHHHCCE ITIADFQGASTDFLRFESKILLDHFGLSEPTYPIAAYAETFPFTYDADLVADLGRTNERH EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCEECHHHHHHHCCCCCCC YPDPDHRLDAWARRFLDEPGETATLEMLSAMNRAISAEFSYAARDTEGTQTPLETLERGS CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCC GSCRDFALLMMEAVRSLGLAARFVSGYLYDPALDGRNASGTVGAGATHAWLQVYLPGAGW CCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCE VEFDPTNALVGGENLIRVAVTRDPSQAVPITGSFAGPGNAFLSMEVEVTLHRQDQNIQVA EEECCCCEEECCCCEEEEEEECCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCCCEEEC >Mature Secondary Structure TRIALTHVTTYRYGAPVTLGEHKMMFRPRDSHDLHIVEATLVLSPVAEVRWMHDVFGNS CEEEEEEEEEEECCCCEEECCCEEEECCCCCCCEEEEEEEHHHCCHHHHHHHHHHHCCE ITIADFQGASTDFLRFESKILLDHFGLSEPTYPIAAYAETFPFTYDADLVADLGRTNERH EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCEECHHHHHHHCCCCCCC YPDPDHRLDAWARRFLDEPGETATLEMLSAMNRAISAEFSYAARDTEGTQTPLETLERGS CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCC GSCRDFALLMMEAVRSLGLAARFVSGYLYDPALDGRNASGTVGAGATHAWLQVYLPGAGW CCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCE VEFDPTNALVGGENLIRVAVTRDPSQAVPITGSFAGPGNAFLSMEVEVTLHRQDQNIQVA EEECCCCEEECCCCEEEEEEECCCCCCCCEEECCCCCCCEEEEEEEEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]