| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593146
Identifier: 83593146
GI number: 83593146
Start: 2107162
End: 2108010
Strand: Reverse
Name: 83593146
Synonym: Rru_A1811
Alternate gene names: NA
Gene position: 2108010-2107162 (Counterclockwise)
Preceding gene: 83593147
Following gene: 83593145
Centisome position: 48.43
GC content: 66.31
Gene sequence:
>849_bases ATGAGCGATACCATCACCTTCTGGGGCGTGCGCGGCTCCATCGCTTGCCCGTTTCCCGGCCATATGGCTTATGGCGGCAA TACCAGCTGCGTCGCCCTTGGCCTGGGCGGGCAAACGGTGATCCTTGATGCCGGCACCGGCATCCGCGCCCTCGGCGCCT CGGCGGCCCTGCGCGGCGTTAGCCGCCTTGCCTTGCTGTTTAGCCATGTCCACCGCGACCATATCGAAGGCTTTCCGTTT TTCGCCCCGGCCCATGATCGGGCGGTGCGCCTGGATATCTTCGCCGGCCCGATCGAGGGCGCCAGCATCCGCCAGTTGCT CGATAACTTGATGTCCCGTCCGATGTTTCCGCTTTCCCTGGACCAGTTGCGCGCGCAAAAAGTTTTTCATGACCTGCCGG CGGCGACGGCCTTCACGCTGTTTGAGCGCATCAAGGTGCGCACCGCCGCGCTCAACCATCCCGGCGGCGCCACCGCCTAT CGCTTCGAGCATGGCGGCCGGGTCGTATGTTATGTCACCGATACCGAACATCGGCCGGGTCAGCCCGATGCCGGGCTGCT TGAGCTGATCGCCGGGGCCGATTATGTCCTTTACGACTCGACCTATACGGATCGCGAGTTTGCCGCCCACCGGGGCTGGG GACATTCGACCTGGGAGGAGGGGGTACGGCTTTGCCGACAGGCGGGGGCCCGCCATCTGGTGATCTTCCACCACGATCCC GATCACGACGACGCCGCCATGGCCGCCATCGAAACCGCGGCCCGCGCCGCCTGGGGCGGCACGCTGGTCGCCCGCGAGGG GATGACCATCGCCCTCGACAGCGGGGTGGTCACCCAGGCCGGGCGTTAG
Upstream 100 bases:
>100_bases AAATCGCCGTCAGTCGTGGCCGCGCCGATCAGCGGCTGGGCCTGCAGCTCGGCTCGCCCGTTCTCGTTCAAGCCGCCGCC CTTGAAAACGACCCCGCGCC
Downstream 100 bases:
>100_bases GGCGGGGGAAATTTATCCGGCTTTTTTGCAATAAACCGTGCTCCCCGCGCGTCATTGCCGATGACCGCACGGCCAGTCCC GGCCGCGCCCTTCGCGGAAA
Product: beta-lactamase-like
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSDTITFWGVRGSIACPFPGHMAYGGNTSCVALGLGGQTVILDAGTGIRALGASAALRGVSRLALLFSHVHRDHIEGFPF FAPAHDRAVRLDIFAGPIEGASIRQLLDNLMSRPMFPLSLDQLRAQKVFHDLPAATAFTLFERIKVRTAALNHPGGATAY RFEHGGRVVCYVTDTEHRPGQPDAGLLELIAGADYVLYDSTYTDREFAAHRGWGHSTWEEGVRLCRQAGARHLVIFHHDP DHDDAAMAAIETAARAAWGGTLVAREGMTIALDSGVVTQAGR
Sequences:
>Translated_282_residues MSDTITFWGVRGSIACPFPGHMAYGGNTSCVALGLGGQTVILDAGTGIRALGASAALRGVSRLALLFSHVHRDHIEGFPF FAPAHDRAVRLDIFAGPIEGASIRQLLDNLMSRPMFPLSLDQLRAQKVFHDLPAATAFTLFERIKVRTAALNHPGGATAY RFEHGGRVVCYVTDTEHRPGQPDAGLLELIAGADYVLYDSTYTDREFAAHRGWGHSTWEEGVRLCRQAGARHLVIFHHDP DHDDAAMAAIETAARAAWGGTLVAREGMTIALDSGVVTQAGR >Mature_281_residues SDTITFWGVRGSIACPFPGHMAYGGNTSCVALGLGGQTVILDAGTGIRALGASAALRGVSRLALLFSHVHRDHIEGFPFF APAHDRAVRLDIFAGPIEGASIRQLLDNLMSRPMFPLSLDQLRAQKVFHDLPAATAFTLFERIKVRTAALNHPGGATAYR FEHGGRVVCYVTDTEHRPGQPDAGLLELIAGADYVLYDSTYTDREFAAHRGWGHSTWEEGVRLCRQAGARHLVIFHHDPD HDDAAMAAIETAARAAWGGTLVAREGMTIALDSGVVTQAGR
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30380; Mature: 30249
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTITFWGVRGSIACPFPGHMAYGGNTSCVALGLGGQTVILDAGTGIRALGASAALRGV CCCCEEEEECCCCEECCCCCCEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH SRLALLFSHVHRDHIEGFPFFAPAHDRAVRLDIFAGPIEGASIRQLLDNLMSRPMFPLSL HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCH DQLRAQKVFHDLPAATAFTLFERIKVRTAALNHPGGATAYRFEHGGRVVCYVTDTEHRPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEEECCCCCCC QPDAGLLELIAGADYVLYDSTYTDREFAAHRGWGHSTWEEGVRLCRQAGARHLVIFHHDP CCCHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCC DHDDAAMAAIETAARAAWGGTLVAREGMTIALDSGVVTQAGR CCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCEECCCCC >Mature Secondary Structure SDTITFWGVRGSIACPFPGHMAYGGNTSCVALGLGGQTVILDAGTGIRALGASAALRGV CCCEEEEECCCCEECCCCCCEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHH SRLALLFSHVHRDHIEGFPFFAPAHDRAVRLDIFAGPIEGASIRQLLDNLMSRPMFPLSL HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCH DQLRAQKVFHDLPAATAFTLFERIKVRTAALNHPGGATAYRFEHGGRVVCYVTDTEHRPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEEEECCCCCCC QPDAGLLELIAGADYVLYDSTYTDREFAAHRGWGHSTWEEGVRLCRQAGARHLVIFHHDP CCCHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCC DHDDAAMAAIETAARAAWGGTLVAREGMTIALDSGVVTQAGR CCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA