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The map label for this gene is 83593144

Identifier: 83593144

GI number: 83593144

Start: 2105982

End: 2106527

Strand: Reverse

Name: 83593144

Synonym: Rru_A1809

Alternate gene names: NA

Gene position: 2106527-2105982 (Counterclockwise)

Preceding gene: 83593145

Following gene: 83593143

Centisome position: 48.39

GC content: 68.13

Gene sequence:

>546_bases
ATGAGCGGGCGCGAAAGGCGCGGCTCGCCGGTTCTGGCCGAAGCGCTGGAAAAGGACCGCGCCCGCTTCGTTCGCTACGT
GCGCGCCAAACTGGGCGGCGCGGCGGCCGAAGAAGCCGAGGACGTGGTCTCGGATCTGGTGCTGCGGCTGGTCGAACGCG
CCGATCTTCCCGAACAGGTTGAAACCATGACGGCTTATCTTTACCGGGCGCTTGGCAATGCCATTATCGATCTGTTCCGT
CGGCGACGGTCGCGGCCGGCGGCGGAGCGCGACTTTGAATCCGCAGACGCCGGAGTCCTGGTCGATCCGGCCCCCAACCC
CGAGGCCCAGGTCCTTACCCGCGAGGCGCTGGCGCGCATCGGCTGGGCGCTGGAACGCCTCAGTCCGGGCGAGCGGGCGG
TGTGGATCGCCGTTGAAGTCGAGGGCTGGACCTTCCGCGCCCTGTCGGAAGCCTGGGGCCAGCCCATCGGCACCTTACTC
GCCCGCAAAAGTCGGGCGACCACCGCGCTGCGCCGGCTTTTGAGCGACGAACGATCGCGTGGATAA

Upstream 100 bases:

>100_bases
CCCGCCGAGGATGCCTGGGGGGCGTGGTGGCGGGCGGAGGGGGAAGGGGCCTATCACGCCTATCTTGCCCGAACCGATGA
CGCGGAGCGCGGGTAAGCCG

Downstream 100 bases:

>100_bases
CCGGGCCGGCCGGCCTCACCGCATTCCCCTAACCTTTTAAGGATGTCACGATGAGCGTTGTTTCAGTTGCAAAAAATGTT
GTTCGCGGCAGCGGCGTTCT

Product: sigma-24 (FecI)

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-24 Factor FecI

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSGRERRGSPVLAEALEKDRARFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQVETMTAYLYRALGNAIIDLFR
RRRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARIGWALERLSPGERAVWIAVEVEGWTFRALSEAWGQPIGTLL
ARKSRATTALRRLLSDERSRG

Sequences:

>Translated_181_residues
MSGRERRGSPVLAEALEKDRARFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQVETMTAYLYRALGNAIIDLFR
RRRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARIGWALERLSPGERAVWIAVEVEGWTFRALSEAWGQPIGTLL
ARKSRATTALRRLLSDERSRG
>Mature_180_residues
SGRERRGSPVLAEALEKDRARFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQVETMTAYLYRALGNAIIDLFRR
RRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARIGWALERLSPGERAVWIAVEVEGWTFRALSEAWGQPIGTLLA
RKSRATTALRRLLSDERSRG

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20167; Mature: 20036

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRERRGSPVLAEALEKDRARFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
ETMTAYLYRALGNAIIDLFRRRRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
GWALERLSPGERAVWIAVEVEGWTFRALSEAWGQPIGTLLARKSRATTALRRLLSDERSR
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure 
SGRERRGSPVLAEALEKDRARFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
ETMTAYLYRALGNAIIDLFRRRRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
GWALERLSPGERAVWIAVEVEGWTFRALSEAWGQPIGTLLARKSRATTALRRLLSDERSR
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA