| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593136
Identifier: 83593136
GI number: 83593136
Start: 2094921
End: 2095352
Strand: Direct
Name: 83593136
Synonym: Rru_A1801
Alternate gene names: NA
Gene position: 2094921-2095352 (Clockwise)
Preceding gene: 83593135
Following gene: 83593139
Centisome position: 48.13
GC content: 61.11
Gene sequence:
>432_bases ATGACGCTGCCGGAGCCGGTGCCGGGCCTCGTCATCTCCTATTCTTATCTCTGGCATGATCAACACCGGCGGGGGGCGGA GGAAGGCCGCAAGACCCGCCCCTGCGCCATTGTTCTTGCCACGGCCGATAGGGACGGCGACACCAGGGTTTATCTGGCCC CGATCACCCACTCCCGGCCGAACGATCCCCATGCCGTGGACCTGTACCCTGGCGTCAAAAAGCACCTGGGATTGGACGAT ATGCCATCCTGGATCGTTACCAGCGAACTCAACCGTTTCATCTGGCCCGGCTATGACCTGCGACCAATCGCCCGTGACAA GCCCGATATCTTTGCCTGGGGATTCCTGCCGATTGAGATTTTCGCCGCGGTGAAGAAAGGAATAGCCGCCCATCAACGGG ACCGACGCCTCCTCCTCACACCGCGGGAATAG
Upstream 100 bases:
>100_bases GACGCCATCGCCTCAGGAGACCTGAGCGAGAGCGAACTGGCGTTGATCGAGGCCGCCGAGGTTCCGCCGCCGCACCGCTA CAGCCTCGACACGTAAGCCA
Downstream 100 bases:
>100_bases TCTGACCGAGTGAGCAGAGCCGGGGTCGATCCTCAAAGCGCGCCCGGACGATCGAAGGCGTCAAGTCGTCGAACGAACCT CGGCCAGGAAGCGAGTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTLPEPVPGLVISYSYLWHDQHRRGAEEGRKTRPCAIVLATADRDGDTRVYLAPITHSRPNDPHAVDLYPGVKKHLGLDD MPSWIVTSELNRFIWPGYDLRPIARDKPDIFAWGFLPIEIFAAVKKGIAAHQRDRRLLLTPRE
Sequences:
>Translated_143_residues MTLPEPVPGLVISYSYLWHDQHRRGAEEGRKTRPCAIVLATADRDGDTRVYLAPITHSRPNDPHAVDLYPGVKKHLGLDD MPSWIVTSELNRFIWPGYDLRPIARDKPDIFAWGFLPIEIFAAVKKGIAAHQRDRRLLLTPRE >Mature_142_residues TLPEPVPGLVISYSYLWHDQHRRGAEEGRKTRPCAIVLATADRDGDTRVYLAPITHSRPNDPHAVDLYPGVKKHLGLDDM PSWIVTSELNRFIWPGYDLRPIARDKPDIFAWGFLPIEIFAAVKKGIAAHQRDRRLLLTPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16330; Mature: 16199
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPEPVPGLVISYSYLWHDQHRRGAEEGRKTRPCAIVLATADRDGDTRVYLAPITHSRP CCCCCCCCCEEEEEHHEECCHHHCCHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC NDPHAVDLYPGVKKHLGLDDMPSWIVTSELNRFIWPGYDLRPIARDKPDIFAWGFLPIEI CCCCEEECCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHH FAAVKKGIAAHQRDRRLLLTPRE HHHHHHHHHHHCCCCEEEECCCC >Mature Secondary Structure TLPEPVPGLVISYSYLWHDQHRRGAEEGRKTRPCAIVLATADRDGDTRVYLAPITHSRP CCCCCCCCEEEEEHHEECCHHHCCHHCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCC NDPHAVDLYPGVKKHLGLDDMPSWIVTSELNRFIWPGYDLRPIARDKPDIFAWGFLPIEI CCCCEEECCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHH FAAVKKGIAAHQRDRRLLLTPRE HHHHHHHHHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA