| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is livK [C]
Identifier: 83593081
GI number: 83593081
Start: 2038223
End: 2039329
Strand: Reverse
Name: livK [C]
Synonym: Rru_A1746
Alternate gene names: 83593081
Gene position: 2039329-2038223 (Counterclockwise)
Preceding gene: 83593082
Following gene: 83593080
Centisome position: 46.85
GC content: 63.5
Gene sequence:
>1107_bases ATGAATAAGTTCCAGACCGGGCTTTTGGCGGCGACCGCCGCGTTCGCGATGGGCGTGGGAAGCGCCCAGGCGGATATCAC CGTGGGTGTCGCCGGGCCGATGACGGGTCAGTACGCCTCCTTCGGCGAGCAGCTTGCCAAGGGCGCCGAACAGGCGGTCA AGGACATCAACGCCAAGGGCGGTGTGCTTGGCGAGAAGCTGGTGCTGAAGAAGGGCGATGACGCCTGCGATCCCAAGCAG GCCGTCGCCGTCGCCAACCAGTTCGTCAACGACAAGGTGGTCTTCGTCGCCGGCCATTTCTGCTCGGGATCGTCGATCCC GGCCTCGGCCGTCTACAACGAAGAAGGCATCGTGCAGATCTCTCCGGCTTCGACCAATCCGAAGCTGACCGAGCAGGGCT TCGAGAACGTCTTCCGCACCTGCGGCCGTGACGACCAGCAGGGTCCGACCGCCGGCGATTTCCTCAAGGCCCATTTCCCC GGCCAGAAGATCGCCATCATCCACGACAAGACCGCCTATGGTAAGGGCCTTGCCGACGAGACCAAATCGGCCCTCAACAA GGCCGGCGTGCAGGAGGCCCTGTACGAGGCGATCACCGCCGGCGAAAAAGACTATTCCGCCCTGGTGACCAAGCTGAAGA ACGAAGGCATAAAGATCATCTATCTTGGTGGCTATCACACCGAGGCCGGGCTGATCATCCGCCAGGCCAAGGAGCAGGGT CTTGACGCCCGCATCGTCTCCGGCGACGCCCTGGTCTCTTCGGAATTCGCCTCGATCGCCGGTCCCGCCGGGGACGGCAC GCTGTTCACCTTCTCGCCCGATCCGCGCAAGAACCCGGAAGCCGCCGCCGTGGTGAAGTCGTTCACCGACGCCGGTTACA ACGCCGAAGGCTATACCCTCTACACCTACGGCGCCGTCCAGGCCTGGGCCCAGGCCGTGGAGAAGGCCAAGTCGACCGAT GTCGACAAGGTGGCCAAGGCGCTCAAGTCCGGCCAGTTCTCGACCGTTCTCGGCCCCATCGGCTTTGACGCCCAGGGCGA CGTGTCGGCCCCGGGCTACGTCATGTACGAATGGAAGGGCGGCAACTACGACTACTTCAAGAACTAA
Upstream 100 bases:
>100_bases CGGGTATCGCAAGGATACCCGGATTGGGGATCGGGCCGGGTGGGTCCGCTTTTCCCCAAGATCTCGATGCGTCCACTTCT GAGAAGGGAGAGTGGTTCAA
Downstream 100 bases:
>100_bases ACCGCTCTCTGGTTTGGTTGCCAAAGACCCGGCGGGGCATCCCCCTCGCCGGGTTTTTGACTTTTTTCTGGTGAAATAAA CCGGCGAATGGGGCTAAATG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNKFQTGLLAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKGGVLGEKLVLKKGDDACDPKQ AVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQISPASTNPKLTEQGFENVFRTCGRDDQQGPTAGDFLKAHFP GQKIAIIHDKTAYGKGLADETKSALNKAGVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQG LDARIVSGDALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTLYTYGAVQAWAQAVEKAKSTD VDKVAKALKSGQFSTVLGPIGFDAQGDVSAPGYVMYEWKGGNYDYFKN
Sequences:
>Translated_368_residues MNKFQTGLLAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKGGVLGEKLVLKKGDDACDPKQ AVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQISPASTNPKLTEQGFENVFRTCGRDDQQGPTAGDFLKAHFP GQKIAIIHDKTAYGKGLADETKSALNKAGVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQG LDARIVSGDALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTLYTYGAVQAWAQAVEKAKSTD VDKVAKALKSGQFSTVLGPIGFDAQGDVSAPGYVMYEWKGGNYDYFKN >Mature_368_residues MNKFQTGLLAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKGGVLGEKLVLKKGDDACDPKQ AVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQISPASTNPKLTEQGFENVFRTCGRDDQQGPTAGDFLKAHFP GQKIAIIHDKTAYGKGLADETKSALNKAGVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQG LDARIVSGDALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTLYTYGAVQAWAQAVEKAKSTD VDKVAKALKSGQFSTVLGPIGFDAQGDVSAPGYVMYEWKGGNYDYFKN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=359, Percent_Identity=41.2256267409471, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI48994941, Length=359, Percent_Identity=41.5041782729805, Blast_Score=279, Evalue=3e-76,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 38575; Mature: 38575
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFQTGLLAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKG CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GVLGEKLVLKKGDDACDPKQAVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQI CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHEECCCCEEEE SPASTNPKLTEQGFENVFRTCGRDDQQGPTAGDFLKAHFPGQKIAIIHDKTAYGKGLADE ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCEEEEEECCCCCCCCCHHH TKSALNKAGVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCC LDARIVSGDALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTL CCEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE YTYGAVQAWAQAVEKAKSTDVDKVAKALKSGQFSTVLGPIGFDAQGDVSAPGYVMYEWKG EEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC GNYDYFKN CCCCCCCC >Mature Secondary Structure MNKFQTGLLAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKG CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GVLGEKLVLKKGDDACDPKQAVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQI CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHEECCCCEEEE SPASTNPKLTEQGFENVFRTCGRDDQQGPTAGDFLKAHFPGQKIAIIHDKTAYGKGLADE ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEECCCCCEEEEEECCCCCCCCCHHH TKSALNKAGVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCC LDARIVSGDALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTL CCEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE YTYGAVQAWAQAVEKAKSTDVDKVAKALKSGQFSTVLGPIGFDAQGDVSAPGYVMYEWKG EEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC GNYDYFKN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA