| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593073
Identifier: 83593073
GI number: 83593073
Start: 2030547
End: 2030933
Strand: Reverse
Name: 83593073
Synonym: Rru_A1738
Alternate gene names: NA
Gene position: 2030933-2030547 (Counterclockwise)
Preceding gene: 83593074
Following gene: 83593070
Centisome position: 46.66
GC content: 57.88
Gene sequence:
>387_bases ATGAACTATACTTACGCCGTTGTAATCGAAACCGATGACCTTGGCGGGTTTAGCGCCTTTTTCCCCGATCTTCCCGGCTG CGTCGGAGCGGGGGATAGCGTGGAAGCGTGCTTTCAAGATGCTCTGGACGCACTTGCACTGCATCTTGCAGGTATGATCG AAGATGGTGACAGCCTGCCCGCCCCCACCCCTTTGTCTGATGTCGAAGTCGATCCCGATATTCAGGTGGCGGCTATTCTG TTGGCTTCGGTTCCCGTAACGGGGCGGACGATGCGTGTGAACATCACCATGGATGCAACACTCGTGGCCGCCATTGATGG CGTGACATCCAACCGAAGCGCCTGGCTGGCCGATGCCGCCTTGCGCGCGTTGCGAAGCAATCGGTAG
Upstream 100 bases:
>100_bases AAGCGGGGTCTCTATGAGAAAAACCTAAAATAAAGGTACTGTAAACTCTACCGATTCCCCTGAAAGGTATTCGGTAAAGG TACCATAGAGGATATATATC
Downstream 100 bases:
>100_bases CACCTTTTCCGTCGTCGGCCGCCACCGCTTGGTGTTCACCTATCTGCCCCCTAACGCGACCAGGGCGACGCGGTTGTCAA GCTGGGCGGCCCATTTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNYTYAVVIETDDLGGFSAFFPDLPGCVGAGDSVEACFQDALDALALHLAGMIEDGDSLPAPTPLSDVEVDPDIQVAAIL LASVPVTGRTMRVNITMDATLVAAIDGVTSNRSAWLADAALRALRSNR
Sequences:
>Translated_128_residues MNYTYAVVIETDDLGGFSAFFPDLPGCVGAGDSVEACFQDALDALALHLAGMIEDGDSLPAPTPLSDVEVDPDIQVAAIL LASVPVTGRTMRVNITMDATLVAAIDGVTSNRSAWLADAALRALRSNR >Mature_128_residues MNYTYAVVIETDDLGGFSAFFPDLPGCVGAGDSVEACFQDALDALALHLAGMIEDGDSLPAPTPLSDVEVDPDIQVAAIL LASVPVTGRTMRVNITMDATLVAAIDGVTSNRSAWLADAALRALRSNR
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13338; Mature: 13338
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYTYAVVIETDDLGGFSAFFPDLPGCVGAGDSVEACFQDALDALALHLAGMIEDGDSLP CCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC APTPLSDVEVDPDIQVAAILLASVPVTGRTMRVNITMDATLVAAIDGVTSNRSAWLADAA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHH LRALRSNR HHHHHCCC >Mature Secondary Structure MNYTYAVVIETDDLGGFSAFFPDLPGCVGAGDSVEACFQDALDALALHLAGMIEDGDSLP CCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC APTPLSDVEVDPDIQVAAILLASVPVTGRTMRVNITMDATLVAAIDGVTSNRSAWLADAA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHH LRALRSNR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA