| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593064
Identifier: 83593064
GI number: 83593064
Start: 2024861
End: 2025637
Strand: Reverse
Name: 83593064
Synonym: Rru_A1729
Alternate gene names: NA
Gene position: 2025637-2024861 (Counterclockwise)
Preceding gene: 83593066
Following gene: 83593062
Centisome position: 46.54
GC content: 62.16
Gene sequence:
>777_bases ATGACCGCCTCTCCCGCGCGCCCCCCCACCGGCAAAACCAGCAAAAAGCGGGCGGAGAAAGCCAGACGCATGACCTTTGG CGCCCGCCTACGCACGTATTTCTTCGCCGGCGTTCTGGTTACGGCGCCGATCGCCATCACCTTCTTCGTCGCCTGGACCT TCATCGAATTCGTCGATCGCAAGGTGGTGGGCAATCTGCCCCAGGCCTATCAGGTCGATCTGCCGGTTCCCGGGATCGGC CTGCTGTTGCTGGTGGTGTTGCTCACCATCATCGGCGCCTTCACCGCCGGATATCTGGGGCGGCTGCTGGTTCGCTTCGG CGAGGGGCTGGTGCAAAGGGTGCCCGTGGTCCGCAGCATCCATGGCGCCCTCAAGCAGATCATCGAGACCATCCTCGCCC AGCAGTCCTCGGCCTTCCGTCAAGTCGTGCTGGTGGAATATCCGCGACGCGGAATGTGGGCGCTTGGTTTCATCACCGGG GTGACGGAAGGCGAGGTGCAGAACCTGACCGAGGACGAGGTGATCAACGTCTTTTTGCCGACCACCCCCAATCCGACCAG CGGCTTTTTGCTGTTCGTCCCACGCCAGGATCTGGTGGTCCTCGACATGTCGGTCGAGGACGGCATCAAGATGATCATCT CGGGCGGCATCTTCACGCCCGCCGACCGCCGGCCCAAGGAGGTGCGCAAGGTTCCCCTGGTCACCGCCTCGCCCGAGGAC GATCCAATCCAAGGAAGCCTCTCCGTCAAAAAAAATCCTGTGCCAACAGAGGTTTAA
Upstream 100 bases:
>100_bases CCTTTTCCCTCGGCGGCCGGGAAGAGTAGTTTATCATATCCCGGTGCGAACCGCCCTGGTTCGCGCCCGTCCACCCGCCC CCCGATCCCGAGGAAGACCG
Downstream 100 bases:
>100_bases CCAGAGCGCAGCGTGCGCACCGCGGCGTCGCGTTCGAACAGATACAGCAGAACGCGCAGCGCCGCGCCATGGGGGCCGGC CAGATCGGGGTCGGTCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTASPARPPTGKTSKKRAEKARRMTFGARLRTYFFAGVLVTAPIAITFFVAWTFIEFVDRKVVGNLPQAYQVDLPVPGIG LLLLVVLLTIIGAFTAGYLGRLLVRFGEGLVQRVPVVRSIHGALKQIIETILAQQSSAFRQVVLVEYPRRGMWALGFITG VTEGEVQNLTEDEVINVFLPTTPNPTSGFLLFVPRQDLVVLDMSVEDGIKMIISGGIFTPADRRPKEVRKVPLVTASPED DPIQGSLSVKKNPVPTEV
Sequences:
>Translated_258_residues MTASPARPPTGKTSKKRAEKARRMTFGARLRTYFFAGVLVTAPIAITFFVAWTFIEFVDRKVVGNLPQAYQVDLPVPGIG LLLLVVLLTIIGAFTAGYLGRLLVRFGEGLVQRVPVVRSIHGALKQIIETILAQQSSAFRQVVLVEYPRRGMWALGFITG VTEGEVQNLTEDEVINVFLPTTPNPTSGFLLFVPRQDLVVLDMSVEDGIKMIISGGIFTPADRRPKEVRKVPLVTASPED DPIQGSLSVKKNPVPTEV >Mature_257_residues TASPARPPTGKTSKKRAEKARRMTFGARLRTYFFAGVLVTAPIAITFFVAWTFIEFVDRKVVGNLPQAYQVDLPVPGIGL LLLVVLLTIIGAFTAGYLGRLLVRFGEGLVQRVPVVRSIHGALKQIIETILAQQSSAFRQVVLVEYPRRGMWALGFITGV TEGEVQNLTEDEVINVFLPTTPNPTSGFLLFVPRQDLVVLDMSVEDGIKMIISGGIFTPADRRPKEVRKVPLVTASPEDD PIQGSLSVKKNPVPTEV
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28270; Mature: 28138
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPARPPTGKTSKKRAEKARRMTFGARLRTYFFAGVLVTAPIAITFFVAWTFIEFVDR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVGNLPQAYQVDLPVPGIGLLLLVVLLTIIGAFTAGYLGRLLVRFGEGLVQRVPVVRSI HHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGALKQIIETILAQQSSAFRQVVLVEYPRRGMWALGFITGVTEGEVQNLTEDEVINVFLP HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCHHHCCCCCCEEEEEEC TTPNPTSGFLLFVPRQDLVVLDMSVEDGIKMIISGGIFTPADRRPKEVRKVPLVTASPED CCCCCCCCEEEEECCCCEEEEECCHHHCHHEEHCCCCCCCCCCCHHHHHHCCEEECCCCC DPIQGSLSVKKNPVPTEV CCCCCCEEECCCCCCCCC >Mature Secondary Structure TASPARPPTGKTSKKRAEKARRMTFGARLRTYFFAGVLVTAPIAITFFVAWTFIEFVDR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVGNLPQAYQVDLPVPGIGLLLLVVLLTIIGAFTAGYLGRLLVRFGEGLVQRVPVVRSI HHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGALKQIIETILAQQSSAFRQVVLVEYPRRGMWALGFITGVTEGEVQNLTEDEVINVFLP HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHCCCCCHHHCCCCCCEEEEEEC TTPNPTSGFLLFVPRQDLVVLDMSVEDGIKMIISGGIFTPADRRPKEVRKVPLVTASPED CCCCCCCCEEEEECCCCEEEEECCHHHCHHEEHCCCCCCCCCCCHHHHHHCCEEECCCCC DPIQGSLSVKKNPVPTEV CCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA