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The map label for this gene is stbB [H]

Identifier: 83593044

GI number: 83593044

Start: 2002802

End: 2003296

Strand: Reverse

Name: stbB [H]

Synonym: Rru_A1709

Alternate gene names: 83593044

Gene position: 2003296-2002802 (Counterclockwise)

Preceding gene: 83593045

Following gene: 83593043

Centisome position: 46.02

GC content: 61.62

Gene sequence:

>495_bases
ATGTCGAGCTTTGAGCGCGCGGGATATCGAGCTTTGAGCGGCTTCCTTCTCGACACCAACATCGTCTCCGGGCTGGCGCC
GTCGAAGTTGGAAGCATCCGCTGACTTCCTCACCTGGCTGGACCGCATGGATGCCGATGGCCGGATATTTCTGTCGGTCG
TCTCCATCCATGAGATCGAGAAGGGAATCGCGCTCCTTGAGCACAAGGGGGCAACGGCAAAGGTCGCGAGCCTGAAGGCA
TGGCTCAGTGGCCTTGTCTCCATGTACGACGACAAGATCATTAGCTTCGATGCGCAGGCTGCCGCGATCGGGGGGCAGTT
GGAAGCGAAGGCGCTCGCGGCCGGCCATGATCCCGGCATGGCCGATGCCGTTATCGCCGGCATCGCTGCAGCGCATGAAC
TCGTCGTTGTCACCCGCAACACGAAGCACTTTCTGCCGTTCGGTATCGCCGTGTTGTCGCCTGACGAGGCCGCTACCAAG
GGGGGCCCGGCATGA

Upstream 100 bases:

>100_bases
ATCGCGCGCAAGGCGCTGACACGCAAACGGGCGGGCCTTGTCAGCTATCTCAGGACGTTTCCAAGCGAAGAGTTCCCGCG
CAACCGCAAACCATCGCGGG

Downstream 100 bases:

>100_bases
CCGCTTCCTCTTGCGCAATTCCGCTACGCGCCGCCCTCTCCCCATGACCATCCGCACCGGCAAGGGCGGGCGCGACCGCA
GGGAAGAACACGCCGAGCGC

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSSFERAGYRALSGFLLDTNIVSGLAPSKLEASADFLTWLDRMDADGRIFLSVVSIHEIEKGIALLEHKGATAKVASLKA
WLSGLVSMYDDKIISFDAQAAAIGGQLEAKALAAGHDPGMADAVIAGIAAAHELVVVTRNTKHFLPFGIAVLSPDEAATK
GGPA

Sequences:

>Translated_164_residues
MSSFERAGYRALSGFLLDTNIVSGLAPSKLEASADFLTWLDRMDADGRIFLSVVSIHEIEKGIALLEHKGATAKVASLKA
WLSGLVSMYDDKIISFDAQAAAIGGQLEAKALAAGHDPGMADAVIAGIAAAHELVVVTRNTKHFLPFGIAVLSPDEAATK
GGPA
>Mature_163_residues
SSFERAGYRALSGFLLDTNIVSGLAPSKLEASADFLTWLDRMDADGRIFLSVVSIHEIEKGIALLEHKGATAKVASLKAW
LSGLVSMYDDKIISFDAQAAAIGGQLEAKALAAGHDPGMADAVIAGIAAAHELVVVTRNTKHFLPFGIAVLSPDEAATKG
GPA

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 17090; Mature: 16959

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFERAGYRALSGFLLDTNIVSGLAPSKLEASADFLTWLDRMDADGRIFLSVVSIHEIE
CCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
KGIALLEHKGATAKVASLKAWLSGLVSMYDDKIISFDAQAAAIGGQLEAKALAAGHDPGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHEECCCCCCH
ADAVIAGIAAAHELVVVTRNTKHFLPFGIAVLSPDEAATKGGPA
HHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SSFERAGYRALSGFLLDTNIVSGLAPSKLEASADFLTWLDRMDADGRIFLSVVSIHEIE
CCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
KGIALLEHKGATAKVASLKAWLSGLVSMYDDKIISFDAQAAAIGGQLEAKALAAGHDPGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHEECCCCCCH
ADAVIAGIAAAHELVVVTRNTKHFLPFGIAVLSPDEAATKGGPA
HHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]