| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593029
Identifier: 83593029
GI number: 83593029
Start: 1985410
End: 1986276
Strand: Direct
Name: 83593029
Synonym: Rru_A1694
Alternate gene names: NA
Gene position: 1985410-1986276 (Clockwise)
Preceding gene: 83593028
Following gene: 83593033
Centisome position: 45.61
GC content: 70.01
Gene sequence:
>867_bases GTGGCCCGCCAGACAAGGGAAAGGGACGGGAAGGTGGCGATCGGTGATCTTCTGAACTGGAACAAACCGCCAACACCGGT ACCCGCCCGCAAGCCGGCGGCCGAACCGGCCGAGGAGGAGGGGGGCAGGGCGCTGGCCCTGCTCACCTCGCTGTATCGCC CGGTGATCGGCGGCTTTGGCGGCCGGGGCGCCGTCTCGGTGGCGGCGGCCGAGGGGCTGCTGCGCGCCGAGGGCGATGTG GAACGCGCCGTGCGCGAGACCGTCCGCCGCACCGCCCTTCAGGCCGGCGCCGCCGGCTTCATGACCGGCCTGGGCGGCCT TGTCACCTTGCCCGTCGCCTTGCCGGCCAATGTGGTTTCGGTGCTGGCCCTGCAAACCCGGCTGGTCGCCACCATCGCCT GCCTGCATGGCCATGACCCGGAAAGCGAGGGCGTGCGCCGGGCGGTGATGCTGGCGGTCGTTGGCCTGTCGCTAGCCGAT TTTGGCCGGGGATCGGGCGTGCGCTTGGGAACGCGGATGAGCCTGCGTCTGCTGGACCGGCTACCGGCGACCAGCGCCCG GGCGCTTAACAAAATGATCGGCCAGCAATTAGCCAACCGCTTGGCCAGTTTGACCCTGGGCAAGGCGGCGCCGGTGGTCG GCTGCGCCATCGGCGGCGGCATGGATTGGGCCGGAACCCGCGCCGTCGGTCTGCTCGCCGATAAAACCTTTAGAGCCGTC CCAACGGACAACGCGACGGACGGCGAGGGCGCGATGATGGCCGACGACCCGAGGCGGGATACGATCCGTATGGCCGAAGA TGTCTTCACCCGCTCGGCGCCGCCCGACAGCGTCATCTTGCTGGGATCCCCAGACCGCGAGCGGTGA
Upstream 100 bases:
>100_bases TTTGGTGATTGACCGGCCCGGACCGCCTTGGCGCAGTCCGGGCCGTTTTTGTTGCGCCGGTCCCAAGCCGACGCCAGATA ACAGGGCAGGTGGGCCGGCC
Downstream 100 bases:
>100_bases ACCGTCGCGGTCTTTTCTCTCCTAGGAGAGAAAAGGGACTCAAAAGCAAACGGTCCGGTCGAATAAGGGTGCCGAACCCA ACTGATCTAATTGTCGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MARQTRERDGKVAIGDLLNWNKPPTPVPARKPAAEPAEEEGGRALALLTSLYRPVIGGFGGRGAVSVAAAEGLLRAEGDV ERAVRETVRRTALQAGAAGFMTGLGGLVTLPVALPANVVSVLALQTRLVATIACLHGHDPESEGVRRAVMLAVVGLSLAD FGRGSGVRLGTRMSLRLLDRLPATSARALNKMIGQQLANRLASLTLGKAAPVVGCAIGGGMDWAGTRAVGLLADKTFRAV PTDNATDGEGAMMADDPRRDTIRMAEDVFTRSAPPDSVILLGSPDRER
Sequences:
>Translated_288_residues MARQTRERDGKVAIGDLLNWNKPPTPVPARKPAAEPAEEEGGRALALLTSLYRPVIGGFGGRGAVSVAAAEGLLRAEGDV ERAVRETVRRTALQAGAAGFMTGLGGLVTLPVALPANVVSVLALQTRLVATIACLHGHDPESEGVRRAVMLAVVGLSLAD FGRGSGVRLGTRMSLRLLDRLPATSARALNKMIGQQLANRLASLTLGKAAPVVGCAIGGGMDWAGTRAVGLLADKTFRAV PTDNATDGEGAMMADDPRRDTIRMAEDVFTRSAPPDSVILLGSPDRER >Mature_287_residues ARQTRERDGKVAIGDLLNWNKPPTPVPARKPAAEPAEEEGGRALALLTSLYRPVIGGFGGRGAVSVAAAEGLLRAEGDVE RAVRETVRRTALQAGAAGFMTGLGGLVTLPVALPANVVSVLALQTRLVATIACLHGHDPESEGVRRAVMLAVVGLSLADF GRGSGVRLGTRMSLRLLDRLPATSARALNKMIGQQLANRLASLTLGKAAPVVGCAIGGGMDWAGTRAVGLLADKTFRAVP TDNATDGEGAMMADDPRRDTIRMAEDVFTRSAPPDSVILLGSPDRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30010; Mature: 29879
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQTRERDGKVAIGDLLNWNKPPTPVPARKPAAEPAEEEGGRALALLTSLYRPVIGGFG CCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCC GRGAVSVAAAEGLLRAEGDVERAVRETVRRTALQAGAAGFMTGLGGLVTLPVALPANVVS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHEEHHHHHHHHHH VLALQTRLVATIACLHGHDPESEGVRRAVMLAVVGLSLADFGRGSGVRLGTRMSLRLLDR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHH LPATSARALNKMIGQQLANRLASLTLGKAAPVVGCAIGGGMDWAGTRAVGLLADKTFRAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEC PTDNATDGEGAMMADDPRRDTIRMAEDVFTRSAPPDSVILLGSPDRER CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC >Mature Secondary Structure ARQTRERDGKVAIGDLLNWNKPPTPVPARKPAAEPAEEEGGRALALLTSLYRPVIGGFG CCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCC GRGAVSVAAAEGLLRAEGDVERAVRETVRRTALQAGAAGFMTGLGGLVTLPVALPANVVS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHEEHHHHHHHHHH VLALQTRLVATIACLHGHDPESEGVRRAVMLAVVGLSLADFGRGSGVRLGTRMSLRLLDR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHH LPATSARALNKMIGQQLANRLASLTLGKAAPVVGCAIGGGMDWAGTRAVGLLADKTFRAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEC PTDNATDGEGAMMADDPRRDTIRMAEDVFTRSAPPDSVILLGSPDRER CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA