| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83593023
Identifier: 83593023
GI number: 83593023
Start: 1979831
End: 1980457
Strand: Direct
Name: 83593023
Synonym: Rru_A1688
Alternate gene names: NA
Gene position: 1979831-1980457 (Clockwise)
Preceding gene: 83593022
Following gene: 83593027
Centisome position: 45.48
GC content: 71.77
Gene sequence:
>627_bases ATGACCCAGGATCTTTCGACCCCCTGCACGGCGTTCGATGGCCCGCGCCGGCTGCTCTCCGGTCCGTTGATCGAGGTGGC CCTGGCGGTGAAAACCGCCGCCGATGGTGGCGCTCCCGGGCCGCTGCGGATGTTTGACGATACCAGCGGGCGGGCGGTAG CCCTTGACCTGCGCGGCGGCAAAAGCGATCTGGTCTCGCGTCTGGTCGCCGCCGCCCCGCTTCCTTCTCCCCAAGCCACG TCCTCTTCGCCCGCAGCCGCCTCCCCCCGGGGACGGGGCCGGCCGAAGCTGGGGGTGGTCGCCCGCGAGGTCACCTTGTT GCCCCGGCATTGGGACTGGCTGGCCGCCCAGCCCGGCGGCACTTCGGCGGTTTTGCGCGATCTGGTCGAAGAGGCGGCCT CCCGGGACGGCCTTCGCCAGCGGGCGCTTTTATCGCGGGAGGCGGCCCATCGCTTTGTGCTGGCGATGGCCGGCGATCTG CCCGGCCATGAGGAGGCGGCGCGGGCGCTCTTAGTCGGCGAGGACGCCCTGTTCGCCGAGCGAAGCCAAGCTTGGCCGGC CGACATCCGCCAGCACGCCCAGGCCCTGGCCTTCGCCGGCCCGCCCCCCGAAAGCGATCCCCTTTAA
Upstream 100 bases:
>100_bases GACGGATGCGGTGGCGGTGCCATGAATTATTCACCCGGGCAATAAAGACGAGTCATTATAATCCTGGTATAAATCCCGCT CCCGACGTCTGGAGTCCGCG
Downstream 100 bases:
>100_bases CGCGGGTTAGTCTTTGCCGAGAGGCGCCGCCTCTCGGCGCTCTCCGCGAAGGGCCAAAGGCCCTTCGAACCCCGGGAAAG GTCGCGGTTGACGTTCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTQDLSTPCTAFDGPRRLLSGPLIEVALAVKTAADGGAPGPLRMFDDTSGRAVALDLRGGKSDLVSRLVAAAPLPSPQAT SSSPAAASPRGRGRPKLGVVAREVTLLPRHWDWLAAQPGGTSAVLRDLVEEAASRDGLRQRALLSREAAHRFVLAMAGDL PGHEEAARALLVGEDALFAERSQAWPADIRQHAQALAFAGPPPESDPL
Sequences:
>Translated_208_residues MTQDLSTPCTAFDGPRRLLSGPLIEVALAVKTAADGGAPGPLRMFDDTSGRAVALDLRGGKSDLVSRLVAAAPLPSPQAT SSSPAAASPRGRGRPKLGVVAREVTLLPRHWDWLAAQPGGTSAVLRDLVEEAASRDGLRQRALLSREAAHRFVLAMAGDL PGHEEAARALLVGEDALFAERSQAWPADIRQHAQALAFAGPPPESDPL >Mature_207_residues TQDLSTPCTAFDGPRRLLSGPLIEVALAVKTAADGGAPGPLRMFDDTSGRAVALDLRGGKSDLVSRLVAAAPLPSPQATS SSPAAASPRGRGRPKLGVVAREVTLLPRHWDWLAAQPGGTSAVLRDLVEEAASRDGLRQRALLSREAAHRFVLAMAGDLP GHEEAARALLVGEDALFAERSQAWPADIRQHAQALAFAGPPPESDPL
Specific function: Unknown
COG id: COG3644
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21754; Mature: 21623
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDLSTPCTAFDGPRRLLSGPLIEVALAVKTAADGGAPGPLRMFDDTSGRAVALDLRGG CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCC KSDLVSRLVAAAPLPSPQATSSSPAAASPRGRGRPKLGVVAREVTLLPRHWDWLAAQPGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCEEECCCCC TSAVLRDLVEEAASRDGLRQRALLSREAAHRFVLAMAGDLPGHEEAARALLVGEDALFAE HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH RSQAWPADIRQHAQALAFAGPPPESDPL HCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TQDLSTPCTAFDGPRRLLSGPLIEVALAVKTAADGGAPGPLRMFDDTSGRAVALDLRGG CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEECCC KSDLVSRLVAAAPLPSPQATSSSPAAASPRGRGRPKLGVVAREVTLLPRHWDWLAAQPGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCEEECCCCC TSAVLRDLVEEAASRDGLRQRALLSREAAHRFVLAMAGDLPGHEEAARALLVGEDALFAE HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH RSQAWPADIRQHAQALAFAGPPPESDPL HCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA